.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "gallery/plotly_phbands_and_dos.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        Click :ref:`here <sphx_glr_download_gallery_plotly_phbands_and_dos.py>`
        to download the full example code or to run this example in your browser via Binder

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_gallery_plotly_phbands_and_dos.py:


Phonon Band structures (Plotly version)
=======================================

This example shows how to plot the phonon band structure of AlAs with plotly.
See tutorial/lesson_rf2.html

.. GENERATED FROM PYTHON SOURCE LINES 9-20

.. code-block:: default

    from abipy.abilab import abiopen
    import abipy.data as abidata

    # Open the PHBST file produced by anaddb and get the phonon bands.
    with abiopen(abidata.ref_file("trf2_5.out_PHBST.nc")) as ncfile:
        phbands = ncfile.phbands

    # Read the Phonon DOS from the netcd file produced by anaddb (prtdos 2)
    with abiopen(abidata.ref_file("trf2_5.out_PHDOS.nc")) as ncfile:
        phdos = ncfile.phdos





.. rst-class:: sphx-glr-script-out

 Out:

 .. code-block:: none

    Warning: file /Users/gmatteo/git_repos/abipy/abipy/data/refs/alas_phonons/trf2_5.out_PHBST.nc does not contain atomic_numbers.
    Particular methods need them!




.. GENERATED FROM PYTHON SOURCE LINES 21-23

plot phonon bands and DOS.
`plot_phonons_lo_to.py` shows how to treat the LO-TO splitting.

.. GENERATED FROM PYTHON SOURCE LINES 23-26

.. code-block:: default


    phbands.plotly(title="AlAs Phonon bands and DOS in eV")






.. raw:: html

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    <br />
    <br />

.. GENERATED FROM PYTHON SOURCE LINES 27-28

plot phonon bands with DOS.

.. GENERATED FROM PYTHON SOURCE LINES 28-31

.. code-block:: default


    phbands.plotly_with_phdos(phdos, units="cm-1", title="AlAs Phonon bands + DOS in cm-1")






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    </div>
    <br />
    <br />

.. GENERATED FROM PYTHON SOURCE LINES 32-33

plot phonon DOS.

.. GENERATED FROM PYTHON SOURCE LINES 33-41

.. code-block:: default


    phdos.plotly(units="cm-1", title="Phonon DOS and IDOS in cm-1")

    # Plot the phonon band structure with different color for each line.
    #phbands.plot_colored_matched(units="cm-1",
    #                             title="AlAs with different color for each line.")

    # sphinx_gallery_thumbnail_path = '_static/plotly_logo.png'





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.. rst-class:: sphx-glr-timing

   **Total running time of the script:** ( 0 minutes  0.564 seconds)


.. _sphx_glr_download_gallery_plotly_phbands_and_dos.py:


.. only :: html

 .. container:: sphx-glr-footer
    :class: sphx-glr-footer-example


  .. container:: binder-badge

    .. image:: images/binder_badge_logo.svg
      :target: https://mybinder.org/v2/gh/abinit/abipy/gh-pages?filepath=notebooks/gallery/plotly_phbands_and_dos.ipynb
      :alt: Launch binder
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  .. container:: sphx-glr-download sphx-glr-download-python

     :download:`Download Python source code: plotly_phbands_and_dos.py <plotly_phbands_and_dos.py>`



  .. container:: sphx-glr-download sphx-glr-download-jupyter

     :download:`Download Jupyter notebook: plotly_phbands_and_dos.ipynb <plotly_phbands_and_dos.ipynb>`


.. only:: html

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    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_