ABINIT Discussion Forums

Good morning to every one i try to compile abinit with this configuration on mac book pro with intel compilers 14.0 before to compile abinit I compiled openmpi with FC=ifort CC=icc CXX=icpc here i put my configuration for abinit ./configure CC="mpicc" CXX="mpicxx" FC="mpif90...

Thanks
I followed all instructions of the post of Jean-Michel Beuken but without success and I don't know what can I do again.
Thanks to help me
Dearly lorenzo

Dear Pouillon excuse me a lot if I bother you but do you have found the flags to compile abinit on mac with intel compiler?
Thanks again for your patience with me.
Dearly lorenzo

Thanks I will wait for your help but do you have some ideas why i am not able to compile abinit with openmpi installed with intel compiler.
thanks write me soon if you can.
dearly lorenzo

Dear pouillon thanks to help me but it doesn't work again in serial with : ./configure FC=ifort CC=icc CXX=icpc CC_LDFLAGS="-Wl,-Rdynamic" FC_LDFLAGS="-Wl,-Rdynamic" i found this error: ld: unknown option: -Rdynamic make[5]: *** [aim] Error 1 make[5]: *** Waiting for unfinished j...

Dear users and developers excuse me if I bother you again but I am not able to compile and install ABINIT 7.6.4 on Mac OS X 10.9.3 with Intel compiler 14 I have two big problem the first is I am not able to compile ABINIT in serial I have a lot of Undefined symbols for architecture x86_64: I used 64...

Hi Yes of course before recompile abinit i did make clean and after the configuration but the problem is always the same Or mpi is broken but not Because i compiled it with intel64 and passed all tests or if i compile abinit without parallel i found ld symbol not found for architecture 86x64 Please ...

Hi I recompiled mpich and openmpi with fort intel64 which ifort /opt/intel/composer_xe_2013_sp1.3.166/bin/intel64/ifort MacBook-Pro-di-Lorenzo-Dona:abinit-7.6.4 lorenzodona$ which mpif90 /Users/lorenzodona/Documents/mpich-3.1/exec/bin/mpif90 MacBook-Pro-di-Lorenzo-Dona:abinit-7.6.4 lorenzodona$ mpif...

I recompiled now both openmpi 1.8.1 and mpich3.0.4 and I have passed all the tests but abinit say that checking whether to enable OpenMP support... no checking whether to build MPI code... yes checking whether the C compiler supports MPI... no checking whether the C++ compiler supports MPI... no che...

Hi and thanks to help me. I installed mpich in this way: ./configure FC=ifort CC=icc CXX=icpc F77=ifort --prefix=/Users/lorenzodona/Desktop/mpich-3.0.4/exec/ after make check I found: MacBook-Pro-di-Lorenzo-Dona:mpich-3.0.4 lorenzodona$ make check make check-recursive Making check in src/mpl /Applic...

Dear jmb I tried also with mpich 3.0.4 compiled with intel compiler and i export the env variables but i found the same problem checking whether to enable OpenMP support... no checking whether to build MPI code... yes checking whether the C compiler supports MPI... no checking whether the C++ compil...

Dear jmb thanks to help me really a lot NO I am not able to solve the 64 bit issue i also used FC="ifort -m64" and fort -m32 but the problem is always the same a lot of d: symbol(s) not found for architecture x86_64 Please can you help me to solce this big problem and now I try for opempi ...

Dear jmb can you help me to solve this problem. Another problem found with intel compiler: I compiled openmpi 1.8.1 with intel compiler without problem but when i try to configure abinit 7.6.4 with: ./configure --enable-64bit-flags="yes" --with-mpi-prefix=/Users/lorenzodona/Documents/openm...

Thanks to everyone and excuse me for my delay but I have a lot of things to study
Dearly lorenzo I solved also the problem with export the wannier90 bin dir and wannier90 compiled by myself..
thanks thanks a lot.

Dear users and developers I try to install abinit 7.6.4 with intel compiler but I found this error: Undefined symbols for architecture x86_64: "_m_profiling_mp_abi_alloc_stat_", referenced from: _drvaim_ in lib63_bader.a(drvaim.o) _m_xmpi_mp_xmpi_distab_4d_ in lib12_hide_mpi.a(m_xmpi.o) _m...

Dear pouillon thanks really to help me but it doesn't work with every value of flags -O2 -O1 and -O0
thanks again

Dear pouillon thanks to help me in this post and in the other one. I solved the problem on netcdf using this configuration ./configure --enable-mpi=yes --enable-64bit-flags=yes --with-mpi-prefix=/Users/lorenzodona/Desktop/openmpi-1.7.1 FCFLAGS_OPTIM="-g -O3 -Wl",-search_paths_first CXXFLAG...

Dear pouillon thanks really to help me i use to compile abinit gcc 4.8.2
GNU Fortran (GCC) version 4.8.2 (x86_64-apple-darwin13)
I added the config file

Dear pouillon I did like you told me using macport but at the end of the compilation i found this error: Undefined symbols for architecture x86_64: "_ATL_cGetNB", referenced from: _ATL_ilaenv in liblapack.a(ATL_ilaenv.o) "_ATL_dGetNB", referenced from: _ATL_ilaenv in liblapack.a(...

Dear Abinit developers and users: I compiled abinit 7.6.3 with this configuration setup: ./configure --enable-mpi=yes --with-mpi-prefix=/opt/local FCFLAGS_OPTIM="-g -O3 -Wl,-search_paths_first" CXXFLAGS="-g -O3 -Wl,-search_paths_first" --enable-zdot-bugfix=yes --enable-optim=safe...

I successfully compiled abinit 7.6.2 without trio flavor on mac os x 10.9.2 but when i try to compile it with trio flavor=netcdf+etsf_io i found this error I think in ncgen3: Making all in ncgen3 depbase=`echo main.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ /opt/local//bin/mpicc -m64 -DHAVE_CONFIG_...

Dear Matteo thanks for your patience with me it is working

thanks tanks a lot again.

dearly lorenzo

I put + like you told me but i found this: MacBook-Pro-di-Lorenzo-Dona:tests lorenzodona$ runtests.py paral -n 2 Traceback (most recent call last): File "./runtests.py", line 22, in <module> import tests File "/Users/lorenzodona/Desktop/abinit-7.6.2/tests/__init__.py", line 11, i...

Dear Matteo: My python version is 2.7.5 I changed the job runner.py in this way: @classmethod def generic_mpi(cls, ompenv=None, timebomb=None): # It should work, provided that the shell environment is properly defined. d = dict() d["mpirun_np"] = "mpiexcec -np" #d["mpirun_ex...

Dear matteo thanks again for your patience I do it like you told me but i found: MacBook-Pro-di-Lorenzo-Dona:tests lorenzodona$ runtests.py -n 2 -c mpi.cfg /Users/lorenzodona/Desktop/abinit-7.6.2/tests/pymods/testsuite.py:802: UserWarning: Cannot find path of bin_name timeout, neither in the build d...