Search found 24 matches
- Fri Nov 09, 2012 2:54 pm
- Forum: Ground state
- Topic: trouble with openmpi+(icc+ifort) when using paral_kgb
- Replies: 4
- Views: 4090
Re: trouble with openmpi+(icc+ifort) when using paral_kgb
I tried intel 12.1.7, it compiles but does not converge during an scf cycle...
- Fri Nov 09, 2012 9:01 am
- Forum: Ground state
- Topic: trouble with openmpi+(icc+ifort) when using paral_kgb
- Replies: 4
- Views: 4090
Re: trouble with openmpi+(icc+ifort) when using paral_kgb
Finally I tried to compile by installing gnu compiler 4.6 first, then intel compiler 12.1, following that openmpi 1.5.4 I worked for intel compilers 4.6.3 but then when I run my abinit-6.12.3, it simply doesn't converge in my scf cycle. Then I tried to compile with intel 12.1.4, but I got the follow...
- Mon Oct 29, 2012 12:14 pm
- Forum: Ground state
- Topic: trouble with openmpi+(icc+ifort) when using paral_kgb
- Replies: 4
- Views: 4090
Re: trouble with openmpi+(icc+ifort) when using paral_kgb
The problem now is that I have gcc 4.7 with which intel 12.1 doesn't seem to be compatible with...
http://software.intel.com/en-us/forums/topic/277969
So I will have to wait for a new version of intel compilers...
http://software.intel.com/en-us/forums/topic/277969
So I will have to wait for a new version of intel compilers...
- Fri Oct 26, 2012 4:43 pm
- Forum: Ground state
- Topic: trouble with openmpi+(icc+ifort) when using paral_kgb
- Replies: 4
- Views: 4090
Re: trouble with openmpi+(icc+ifort) when using paral_kgb
I tried compiling with intel without mkl libraries but same problem. I tried also with LDA instead of GGA... In view of what Yann Pouillon suggest in this other post "HALF SOLVED] abinit6.12.3 crashes in more than 1 node", I will try another version of intel compilers (I used 13.0.). I wil...
- Fri Oct 26, 2012 2:58 pm
- Forum: Ground state
- Topic: trouble with openmpi+(icc+ifort) when using paral_kgb
- Replies: 4
- Views: 4090
trouble with openmpi+(icc+ifort) when using paral_kgb
Dear abinit users and developpers, I am trying to benchmark abinit on my station (16 cores). So I did several tests. I used abinit 6.12.3 - opempi 1.6.2 with gcc 4.7.2 (without particular configuration options except openmpi): everything runs perfectly - same + mkl library for fftw and linalgo : _ p...
- Thu Sep 20, 2012 12:08 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] Problem when compiling 6.12.3 with Openmpi
- Replies: 18
- Views: 16393
Re: [SOLVED] Problem when compiling 6.12.3 with Openmpi
Hi,
ok good news!
Do you have any expected date for the next abinit released?
Thanks
ok good news!
Do you have any expected date for the next abinit released?
Thanks
- Wed Sep 19, 2012 2:16 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] Problem when compiling 6.12.3 with Openmpi
- Replies: 18
- Views: 16393
Re: [SOLVED] Problem when compiling 6.12.3 with Openmpi
I finally got through it... I used openmpi, icc and ifort on openuse 12.1 (but I think I would have the same behavior with gcc and gfortran). Actually what happens to me was that during the compilation the lib for netcdf was not redirected in the good directory: it was directed to: ~/abinit/fallback...
- Thu Sep 13, 2012 10:24 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] Problem when compiling 6.12.3 with Openmpi
- Replies: 18
- Views: 16393
Re: [SOLVED] Problem when compiling 6.12.3 with Openmpi
Thanks a lot for your answer,
I will give a try to this flavor.
Actullay I tried to disable etsf-io with "--enable-etsf-io=no" but it looks like it was not a good idea since I got the same error message.
Thanks again, I will let you know about my progress...
PY
I will give a try to this flavor.
Actullay I tried to disable etsf-io with "--enable-etsf-io=no" but it looks like it was not a good idea since I got the same error message.
Thanks again, I will let you know about my progress...
PY
- Thu Sep 13, 2012 4:36 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] Problem when compiling 6.12.3 with Openmpi
- Replies: 18
- Views: 16393
Re: [SOLVED] Problem when compiling 6.12.3 with Openmpi
Sorry I forgot to paste the error message that I got from the compilation : abinit-6.12.3/fallbacks/exports/lib -lnetcdf" --with-moduledir="/home/prodhomme/Simulation/abinit-6.12.3/fallbacks/exports/include" configure: loading site script /usr/share/site/x86_64-unknown-linux-gnu check...
- Thu Sep 13, 2012 4:31 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] Problem when compiling 6.12.3 with Openmpi
- Replies: 18
- Views: 16393
Re: [SOLVED] Problem when compiling 6.12.3 with Openmpi
Dear Abinit users and developpers, I was wondering if anybody already tried to compile abinit 6.12.3 on opensuse with openmpi and GNU compilers. I guess I have some trouble because of the command: gfortran -V With compiler I got the following error message: gfortran: error: unrecognized option ‘-V’ ...
- Tue Mar 29, 2011 5:17 pm
- Forum: Link to other codes
- Topic: Generation of a PAW file for Gallium
- Replies: 2
- Views: 4578
Re: Generation of a PAW file for Gallium
Dear Alain, Thanks a lot for your answer, Actually for the moment I checked my PAW pseudopotential on GaAs only (since this material is much more known than pure Ga), the total energy is converged within 1mHa at a 26 Ha cutoff. First, I was afraid by such a high cutoff, since following the tutorial ...
- Tue Mar 29, 2011 3:55 pm
- Forum: Configuring and compiling ABINIT
- Topic: [bug fixed v6.6] running abinit-6.4.3 on IBM power6
- Replies: 5
- Views: 5060
Re: running abinit-6.4.3 on IBM power6
yes exactly,
you are welcome.
Pierre-Yves
you are welcome.
Pierre-Yves
- Mon Mar 28, 2011 5:44 pm
- Forum: Link to other codes
- Topic: Generation of a PAW file for Gallium
- Replies: 2
- Views: 4578
Generation of a PAW file for Gallium
Hi everybody, I am attempting to generate a PAW file for Gallium including 3s, 3p, 3d, 4s, 4p states. I include one more partial waves for each angular momentum, so that I get 3 partial waves for each angular momentum (I need more than 2 partial waves per angular momentum, since I plan to carry out ...
- Mon Mar 28, 2011 10:57 am
- Forum: Configuring and compiling ABINIT
- Topic: [bug fixed v6.6] running abinit-6.4.3 on IBM power6
- Replies: 5
- Views: 5060
Re: running abinit-6.4.3 on IBM power6
We (Markus Ramp and I) already told Xavier Gonze about this leak.
- Mon Mar 21, 2011 6:41 pm
- Forum: Configuring and compiling ABINIT
- Topic: [bug fixed v6.6] running abinit-6.4.3 on IBM power6
- Replies: 5
- Views: 5060
Re: running abinit-6.4.3 on IBM power6
It seems that there is a memory leak...
- Mon Feb 28, 2011 3:41 pm
- Forum: Configuring and compiling ABINIT
- Topic: [bug fixed v6.6] running abinit-6.4.3 on IBM power6
- Replies: 5
- Views: 5060
[bug fixed v6.6] running abinit-6.4.3 on IBM power6
Hi, I have compiled abinit-6.4.3 on IBM power6, I have been able to run the test successfully, then I run a G0W0 calculation with the plasmon pole model of Godby and Needs, which finished without any trouble. Then I tried to run some calculation without any plasmon pole, i.e. using the numerical int...
- Wed Jan 05, 2011 12:28 pm
- Forum: Many-body perturbation theory
- Topic: gwcalctyp 10 in version 6.4.2
- Replies: 0
- Views: 2499
gwcalctyp 10 in version 6.4.2
Dear abiniters, I do some GW calculations with abinit, I was using the version 6.0.4, but since I wanted to exploit the new features of abinit to save time (e.g. symsigma) I migrate to version 6.4.2. Everything is fine with both version as long as I use gwcalctyp<10 but then I tried gwcalctyp=10 wit...
- Mon Sep 06, 2010 11:15 am
- Forum: Improving ABINIT
- Topic: mistake in the derivative of the bessel function?
- Replies: 6
- Views: 5266
Re: mistake in the derivative of the bessel function?
Yes I think every thing is fine is the routine pspnl.f90.
Thanks for the advice, actually I am also looking at the fhi98pp code in the same time, but I probably did it too fast and I didn't notice my mistake.
Best Regards
Thanks for the advice, actually I am also looking at the fhi98pp code in the same time, but I probably did it too fast and I didn't notice my mistake.
Best Regards
- Sun Sep 05, 2010 5:33 pm
- Forum: Improving ABINIT
- Topic: mistake in the derivative of the bessel function?
- Replies: 6
- Views: 5266
Re: mistake in the derivative of the bessel function?
Thanks for your answer, I understood MY mistake, I was using the Bessel function of the first kind instead of the spherical ones. To answer your question I am trying to implement a pseudo empirical code, and I am trying to calculate the Kleinman-Bylander form of the pseudopotential, since I am a for...
- Fri Sep 03, 2010 10:46 am
- Forum: Improving ABINIT
- Topic: mistake in the derivative of the bessel function?
- Replies: 6
- Views: 5266
Re: mistake in the derivative of the bessel function?
Sorry for my second post, this is what happen when making several things at a time. But finally I am still thinking that my first post is right, The derivative of the Bessel function should be : $dj_n(qr)/dx = 2\pi r [ j_{n-1}(2\pi q r) - \frac{n}{2\pi q r} j_n(2\pi q r) dr]$ whereas the following f...
- Thu Sep 02, 2010 10:48 am
- Forum: Improving ABINIT
- Topic: mistake in the derivative of the bessel function?
- Replies: 6
- Views: 5266
Re: mistake in the derivative of the bessel function?
ok sorry, this is my mistake, the spline doesn't involve the first but the second derivative.
Sorry again for this message
PYP
Sorry again for this message
PYP
- Thu Sep 02, 2010 10:22 am
- Forum: Improving ABINIT
- Topic: mistake in the derivative of the bessel function?
- Replies: 6
- Views: 5266
mistake in the derivative of the bessel function?
Hi, I am not sure but it seems to me that there is a mistake in the derivative of the bessel function during the settlement of the kleinman-bylander projector of the pseudopotential, in the file 65_psp/psp5nl.F90. The mistake would be at the lines : 316 396 473 The derivative of the Bessel function ...
- Wed Jun 30, 2010 7:12 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] atompaw compilation
- Replies: 2
- Views: 4877
Re: atompaw compilation
Thanks a lot !
It's working now.
Cheers
It's working now.
Cheers
- Wed May 19, 2010 6:47 pm
- Forum: Configuring and compiling ABINIT
- Topic: [SOLVED] atompaw compilation
- Replies: 2
- Views: 4877
[SOLVED] atompaw compilation
I tried to compile atompaw with intel 11.1 compiler but it ends with this error message: anderson_realmix.f90:(.text+0x122c): undefined reference to `dgesdd_' basis.o: In function `basis_mp_diagonalizer_': basis.f90:(.text+0x36720): undefined reference to `dsyev_' basis.f90:(.text+0x3745c): undefine...