Search found 12 matches

by gryko
Sun Oct 06, 2013 7:29 pm
Forum: Configuring and compiling ABINIT
Topic: Problem emerged after successful configuring [SOLVED]
Replies: 3
Views: 6391

Re: Problem emerged after successful configuring [SOLVED]

I had the same problem - indeed, the FFTW3 must be compiled with the --enable-float option.
In fact, the FFTW3 must be compiled twice, without the --enable-float option to
make libfftw3 library, and then with the --enable-float option to make libfftw3f library.

Thank you,
Jan Gryko
by gryko
Fri Oct 04, 2013 7:50 pm
Forum: Configuring and compiling ABINIT
Topic: Execution time and memory with ACLM
Replies: 2
Views: 3498

Re: Execution time and memory with ACLM

Thank you very much for your quick answer. Here are more tests for two acml libraries: libacml and libacml_mp for Vishera 8350: Abinit linked with libacml run with mpirun -np 4 or mpirun -np 8 uses 4 or 8 cores, almost 100% Abinit linked with libacml_mp runs with mpirun -np 4 using 8 cores at about ...
by gryko
Thu Oct 03, 2013 6:15 pm
Forum: Configuring and compiling ABINIT
Topic: Execution time and memory with ACLM
Replies: 2
Views: 3498

Execution time and memory with ACLM

Hello, Here are excution times of Abinit compiled with and without ACML library using gfortran and internal FFT. System: AMD 8350 Vishera 4.0 GHz CPU (8 cores), 32 GB memory. Input: scf calculation for 34 Si atoms in FCC cell. Execution times per core (8 cores) Abinit 7.4.2 compiled with ACML 1861 A...
by gryko
Sat Sep 28, 2013 6:07 pm
Forum: Configuring and compiling ABINIT
Topic: Abinit-7.2.1 compilation error with fftw3-mkl [SOLVED]
Replies: 16
Views: 30907

Abinit-7.4.2 - compilation errors [SOLVED]

Hello, I am trying to compile Abinit-7.4.2 on single CPU AMD 8-cores processor PC, running Fedora-18, with mpi, and gfortran (mpif90). I installed libxc and atompaw, ACML, FFT3W (no problems, all tests passed), the configuration runs fine, but during compilation I am getting errors from this subrout...
by gryko
Tue Jun 11, 2013 5:33 pm
Forum: Response calculations
Topic: ETOT in phonon calculations
Replies: 4
Views: 4067

Convergence in phonon calculations

In phonon calculations, the ETOT quantity (which is, as pointed out by Prof. Zwanziger, is the second derivative with respect to the perturbation) converges very quickly. But the square of density/potential residues converges much more slowly. Question: Is it OK to get convergence in ETOT only, sinc...
by gryko
Fri May 24, 2013 3:58 pm
Forum: Response calculations
Topic: ETOT in phonon calculations
Replies: 4
Views: 4067

Re: ETOT in phonon calculations

Thank you very much for quick answer. Perfectly clear.

JG
by gryko
Fri May 24, 2013 3:38 am
Forum: Response calculations
Topic: ETOT in phonon calculations
Replies: 4
Views: 4067

ETOT in phonon calculations

Hello,

Could you help me to understand why ETOT is jumping so much in phonon calculations? I just run trf2_x. example and in the first run
ETOT ~ -9.7 Ha but then it jumps to large positive values for different q-vectors.

Thank you,

Jan Gryko
by gryko
Fri May 24, 2013 2:56 am
Forum: Ground state
Topic: Optimization and scf
Replies: 2
Views: 2644

Re: Optimization and scf

Hello Gabriel,

Thank you very much for your answer. Indeed, increasing ecut to 30 Ha (in my case) reduced the difference between opt and scf runs to very small
value.

Best,
JG
by gryko
Wed May 22, 2013 3:54 pm
Forum: Ground state
Topic: Optimization and scf
Replies: 2
Views: 2644

Optimization and scf

Hello, I would like to ask to help me to understand my results. I run optimization of the unit cell and coordinates (Abinit 7.2.1) of FCC solid containing 2 Na and 34 Si atoms in reduced FCC cell. Here are my results: Run 1. optimize acell and coordinates starting with experimental geometry and use ...
by gryko
Wed May 22, 2013 3:26 pm
Forum: Configuring and compiling ABINIT
Topic: Abinit 7.2.1 GCC 4.6.3 openmpi [SOLVED]
Replies: 10
Views: 11207

Re: Abinit 7.2.1 GCC 4.6.3 openmpi [SOLVED]

Hello jmb:

Thank you very much for your help. The problem was with "aggressive" option.
JG
by gryko
Mon May 13, 2013 4:43 pm
Forum: Configuring and compiling ABINIT
Topic: Abinit 7.2.1 GCC 4.6.3 openmpi [SOLVED]
Replies: 10
Views: 11207

Re: Abinit 7.2.1 GCC 4.6.3 openmpi [SOLVED]

Thank you very much for your tip. Unfortunately, the error is the same, no change. The binary version of abinit-7.2.1 from the abinit web site runs OK, but I want to compile abinit with different options and compare. Thank you very much for your help. The configure script was: ./configure --with-pre...
by gryko
Sun May 12, 2013 7:37 pm
Forum: Configuring and compiling ABINIT
Topic: Abinit 7.2.1 GCC 4.6.3 openmpi [SOLVED]
Replies: 10
Views: 11207

Re: Abinit 7.2.1 GCC 4.6.3 openmpi - syntax error [SOLVED]

Hello: There are several posts on Syntax error in Abinit-7.2.1, in m_paw_dmft.F90. I am getting the same error and I cannot solve the problem. Here is an excerpt from the make: make[3]: Leaving directory `/home/gryko/abinit-7.2.1/src/65_psp' Making all in 66_paw make[3]: Entering directory `/home/gr...