Calculating electron-phonon coupling and MacMillan Tc

Phonons, DFPT, electron-phonon, electric-field response, mechanical response…

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bahadir.altintas
Posts: 5
Joined: Wed Jul 20, 2011 4:33 pm

Calculating electron-phonon coupling and MacMillan Tc

Post by bahadir.altintas » Tue Oct 18, 2011 5:22 pm

Hi,
I try to calculate Tc of Be2Li as in the article http://link.aps.org/doi/10.1103/PhysRevB.78.172501 for 20x20x20 k-mesh and 2x2x2, 4x4x4, 5x5x5 qpt subgrid.
I can get the nearly same phonon band structure but the calculated Tc is very low(0.315 K, lambda=0.53 for 5x5x5 and mustar=0.1 and decreasing with increasing q-grid or mustar) from the Tc given in article(2.5K and lambda=0.41). here is my files for calculation:

MAIN Calculation files
files

Code: Select all

input.Be2Li_82GPaphonon
output.BeLi2_82GPaphonon
Be2Li_82GPaphononi
Be2Li_82GPaphonono
Be2Li_82GPaphononv
04-Be.LDA.fhi
03-Li.LDA.fhi


input.Be2Li_82GPaphonon

Code: Select all

#
#  the sequence of datasets makes the ground states and
#   all of the explicit perturbations of the single
#   Al atom in all directions, for the irreducible
#   qpoints in a 5x5x5 subgrid.
#
#  Note that the q-point grid(5x5x5) must be a sub-grid of the k-point grid (20x20x20)
#
ndtset 16
#
# DATASET 1 : make ground state wavefunctions and density
#
tolwfr1 1.0d-20
nline1 8    # This is to expedite the convergence of higher-lying bands
rfphon1  0  # for DS1 do _not_ do perturbation
nqpt1 0     # for DS1 do _not_ do perturbation
prtwf1 1    # need GS wavefunctions for further runs
getwfk1  0
# enforce calculation of forces at each SCF step
optforces 1
# qpt grid generated for 5 5 5

qpt2     0.00000000E+00  0.00000000E+00  0.00000000E+00
qpt3     2.00000000E-01  0.00000000E+00  0.00000000E+00
qpt4     4.00000000E-01  0.00000000E+00  0.00000000E+00
qpt5     2.00000000E-01  2.00000000E-01  0.00000000E+00
qpt6     4.00000000E-01  2.00000000E-01  0.00000000E+00
qpt7     0.00000000E+00  0.00000000E+00  2.00000000E-01
qpt8     2.00000000E-01  0.00000000E+00  2.00000000E-01
qpt9     4.00000000E-01  0.00000000E+00  2.00000000E-01
qpt10    2.00000000E-01  2.00000000E-01  2.00000000E-01
qpt11    4.00000000E-01  2.00000000E-01  2.00000000E-01
qpt12    0.00000000E+00  0.00000000E+00  4.00000000E-01
qpt13    2.00000000E-01  0.00000000E+00  4.00000000E-01
qpt14    4.00000000E-01  0.00000000E+00  4.00000000E-01
qpt15    2.00000000E-01  2.00000000E-01  4.00000000E-01
qpt16    4.00000000E-01  2.00000000E-01  4.00000000E-01

#
# general data for all phonon calculations:
#
rfatpol 1 6 rfdir 1 1 1
rfphon  1
prtwf   0  # for response function runs, do not keep first order wavefunctions
tolvrs  1.0e-5
getwfk  1
nqpt 1
prepgkk 1 # force all perturbations to be calculated for q-points considered
prtgkk  1  # print out GKK files containing electron-phonon coupling

#
#  Common data for GS and perturbation runs
#

#
#  the kpoint grid is minimalistic to keep the calculation
#   manageable.
#
ngkpt 20 20 20
kptopt 3 # keep all k-points. Also for ground state, because of eventual transport calculations
#
#  use a centered grid for the kpoints: obligatory for el-ph for the moment
#
nshiftk 1
shiftk 0.0 0.0 0.0

#
#  as is the kinetic energy cutoff
#
ecut 18.0
#
#  include metallic occupation function with a small smearing
#
occopt 3
tsmear 0.001
nstep 800
##### space group Pm -3 (#200); Bravais cP (primitive cubic)-unit-cell contents ###
#Definition of the unit cell

acell 5.8684705768E+00  5.8684705768E+00  7.3408254340E+00 Bohr
angdeg 2*90 120
spgroup        191
brvltt         -1
chkprim        0
natrd          6
ntypat         2
typat          1 1 2 1 2 1
znucl          4 3
nband         15
natom         6
             xred    -7.7814870562E-19 -7.7814870562E-19  2.7352482351E-01
                       3.3333333333E-01  6.6666666667E-01  5.0000000000E-01
                       3.3333333333E-01  6.6666666667E-01 -4.7426742443E-19
                       6.6666666667E-01  3.3333333333E-01  5.0000000000E-01
                       6.6666666667E-01  3.3333333333E-01 -4.7426742443E-19
                       7.7814870562E-19  7.7814870562E-19  7.2647517649E-01



DDB Merge input
mergeddb.in

Code: Select all

Be2Li_82GPaphonon.ddb.out
Total ddb for Be2Li 82GPa hR system
15
Be2Li_82GPaphonono_DS2_DDB
Be2Li_82GPaphonono_DS3_DDB
Be2Li_82GPaphonono_DS4_DDB
Be2Li_82GPaphonono_DS5_DDB
Be2Li_82GPaphonono_DS6_DDB
Be2Li_82GPaphonono_DS7_DDB
Be2Li_82GPaphonono_DS8_DDB
Be2Li_82GPaphonono_DS9_DDB
Be2Li_82GPaphonono_DS10_DDB
Be2Li_82GPaphonono_DS11_DDB
Be2Li_82GPaphonono_DS12_DDB
Be2Li_82GPaphonono_DS13_DDB
Be2Li_82GPaphonono_DS14_DDB
Be2Li_82GPaphonono_DS15_DDB
Be2Li_82GPaphonono_DS16_DDB


GKK merge input
mergegkk.in

Code: Select all

Be2Li_82GPaphonono_GKK.bin   # Name of output file
0                    # binary (0) or ascii (1) output
Be2Li_82GPaphonono_DS1_WFK   # GS wavefunction file
0 270 270               # number of 1WF files, of GKK files, and of perturbations in the GKK files
Be2Li_82GPaphonono_DS2_GKK1 # DS2
Be2Li_82GPaphonono_DS2_GKK2
Be2Li_82GPaphonono_DS2_GKK3
Be2Li_82GPaphonono_DS2_GKK4
Be2Li_82GPaphonono_DS2_GKK5
Be2Li_82GPaphonono_DS2_GKK6
Be2Li_82GPaphonono_DS2_GKK7
Be2Li_82GPaphonono_DS2_GKK8
Be2Li_82GPaphonono_DS2_GKK9
Be2Li_82GPaphonono_DS2_GKK10
Be2Li_82GPaphonono_DS2_GKK11
Be2Li_82GPaphonono_DS2_GKK12
Be2Li_82GPaphonono_DS2_GKK13
Be2Li_82GPaphonono_DS2_GKK14
Be2Li_82GPaphonono_DS2_GKK15
Be2Li_82GPaphonono_DS2_GKK16
Be2Li_82GPaphonono_DS2_GKK17
Be2Li_82GPaphonono_DS2_GKK18
Be2Li_82GPaphonono_DS3_GKK1 # DS3
Be2Li_82GPaphonono_DS3_GKK2
Be2Li_82GPaphonono_DS3_GKK3
Be2Li_82GPaphonono_DS3_GKK4
Be2Li_82GPaphonono_DS3_GKK5
Be2Li_82GPaphonono_DS3_GKK6
Be2Li_82GPaphonono_DS3_GKK7
Be2Li_82GPaphonono_DS3_GKK8
Be2Li_82GPaphonono_DS3_GKK9
Be2Li_82GPaphonono_DS3_GKK10
Be2Li_82GPaphonono_DS3_GKK11
Be2Li_82GPaphonono_DS3_GKK12
Be2Li_82GPaphonono_DS3_GKK13
Be2Li_82GPaphonono_DS3_GKK14
Be2Li_82GPaphonono_DS3_GKK15
Be2Li_82GPaphonono_DS3_GKK16
Be2Li_82GPaphonono_DS3_GKK17
Be2Li_82GPaphonono_DS3_GKK18
Be2Li_82GPaphonono_DS4_GKK1 #DS4
Be2Li_82GPaphonono_DS4_GKK2
Be2Li_82GPaphonono_DS4_GKK3
Be2Li_82GPaphonono_DS4_GKK4
Be2Li_82GPaphonono_DS4_GKK5
Be2Li_82GPaphonono_DS4_GKK6
Be2Li_82GPaphonono_DS4_GKK7
Be2Li_82GPaphonono_DS4_GKK8
Be2Li_82GPaphonono_DS4_GKK9
Be2Li_82GPaphonono_DS4_GKK10
Be2Li_82GPaphonono_DS4_GKK11
Be2Li_82GPaphonono_DS4_GKK12
Be2Li_82GPaphonono_DS4_GKK13
Be2Li_82GPaphonono_DS4_GKK14
Be2Li_82GPaphonono_DS4_GKK15
Be2Li_82GPaphonono_DS4_GKK16
Be2Li_82GPaphonono_DS4_GKK17
Be2Li_82GPaphonono_DS4_GKK18
Be2Li_82GPaphonono_DS5_GKK1 #DS5
Be2Li_82GPaphonono_DS5_GKK2
Be2Li_82GPaphonono_DS5_GKK3
Be2Li_82GPaphonono_DS5_GKK4
Be2Li_82GPaphonono_DS5_GKK5
Be2Li_82GPaphonono_DS5_GKK6
Be2Li_82GPaphonono_DS5_GKK7
Be2Li_82GPaphonono_DS5_GKK8
Be2Li_82GPaphonono_DS5_GKK9
Be2Li_82GPaphonono_DS5_GKK10
Be2Li_82GPaphonono_DS5_GKK11
Be2Li_82GPaphonono_DS5_GKK12
Be2Li_82GPaphonono_DS5_GKK13
Be2Li_82GPaphonono_DS5_GKK14
Be2Li_82GPaphonono_DS5_GKK15
Be2Li_82GPaphonono_DS5_GKK16
Be2Li_82GPaphonono_DS5_GKK17
Be2Li_82GPaphonono_DS5_GKK18
Be2Li_82GPaphonono_DS6_GKK1 # DS6
Be2Li_82GPaphonono_DS6_GKK2
Be2Li_82GPaphonono_DS6_GKK3
Be2Li_82GPaphonono_DS6_GKK4
Be2Li_82GPaphonono_DS6_GKK5
Be2Li_82GPaphonono_DS6_GKK6
Be2Li_82GPaphonono_DS6_GKK7
Be2Li_82GPaphonono_DS6_GKK8
Be2Li_82GPaphonono_DS6_GKK9
Be2Li_82GPaphonono_DS6_GKK10
Be2Li_82GPaphonono_DS6_GKK11
Be2Li_82GPaphonono_DS6_GKK12
Be2Li_82GPaphonono_DS6_GKK13
Be2Li_82GPaphonono_DS6_GKK14
Be2Li_82GPaphonono_DS6_GKK15
Be2Li_82GPaphonono_DS6_GKK16
Be2Li_82GPaphonono_DS6_GKK17
Be2Li_82GPaphonono_DS6_GKK18
Be2Li_82GPaphonono_DS7_GKK1 # DS7
Be2Li_82GPaphonono_DS7_GKK2
Be2Li_82GPaphonono_DS7_GKK3
Be2Li_82GPaphonono_DS7_GKK4
Be2Li_82GPaphonono_DS7_GKK5
Be2Li_82GPaphonono_DS7_GKK6
Be2Li_82GPaphonono_DS7_GKK7
Be2Li_82GPaphonono_DS7_GKK8
Be2Li_82GPaphonono_DS7_GKK9
Be2Li_82GPaphonono_DS7_GKK10
Be2Li_82GPaphonono_DS7_GKK11
Be2Li_82GPaphonono_DS7_GKK12
Be2Li_82GPaphonono_DS7_GKK13
Be2Li_82GPaphonono_DS7_GKK14
Be2Li_82GPaphonono_DS7_GKK15
Be2Li_82GPaphonono_DS7_GKK16
Be2Li_82GPaphonono_DS7_GKK17
Be2Li_82GPaphonono_DS7_GKK18
Be2Li_82GPaphonono_DS8_GKK1 # DS8
Be2Li_82GPaphonono_DS8_GKK2
Be2Li_82GPaphonono_DS8_GKK3
Be2Li_82GPaphonono_DS8_GKK4
Be2Li_82GPaphonono_DS8_GKK5
Be2Li_82GPaphonono_DS8_GKK6
Be2Li_82GPaphonono_DS8_GKK7
Be2Li_82GPaphonono_DS8_GKK8
Be2Li_82GPaphonono_DS8_GKK9
Be2Li_82GPaphonono_DS8_GKK10
Be2Li_82GPaphonono_DS8_GKK11
Be2Li_82GPaphonono_DS8_GKK12
Be2Li_82GPaphonono_DS8_GKK13
Be2Li_82GPaphonono_DS8_GKK14
Be2Li_82GPaphonono_DS8_GKK15
Be2Li_82GPaphonono_DS8_GKK16
Be2Li_82GPaphonono_DS8_GKK17
Be2Li_82GPaphonono_DS8_GKK18
Be2Li_82GPaphonono_DS9_GKK1 # DS9
Be2Li_82GPaphonono_DS9_GKK2
Be2Li_82GPaphonono_DS9_GKK3
Be2Li_82GPaphonono_DS9_GKK4
Be2Li_82GPaphonono_DS9_GKK5
Be2Li_82GPaphonono_DS9_GKK6
Be2Li_82GPaphonono_DS9_GKK7
Be2Li_82GPaphonono_DS9_GKK8
Be2Li_82GPaphonono_DS9_GKK9
Be2Li_82GPaphonono_DS9_GKK10
Be2Li_82GPaphonono_DS9_GKK11
Be2Li_82GPaphonono_DS9_GKK12
Be2Li_82GPaphonono_DS9_GKK13
Be2Li_82GPaphonono_DS9_GKK14
Be2Li_82GPaphonono_DS9_GKK15
Be2Li_82GPaphonono_DS9_GKK16
Be2Li_82GPaphonono_DS9_GKK17
Be2Li_82GPaphonono_DS9_GKK18
Be2Li_82GPaphonono_DS10_GKK1 # DS10
Be2Li_82GPaphonono_DS10_GKK2
Be2Li_82GPaphonono_DS10_GKK3
Be2Li_82GPaphonono_DS10_GKK4
Be2Li_82GPaphonono_DS10_GKK5
Be2Li_82GPaphonono_DS10_GKK6
Be2Li_82GPaphonono_DS10_GKK7
Be2Li_82GPaphonono_DS10_GKK8
Be2Li_82GPaphonono_DS10_GKK9
Be2Li_82GPaphonono_DS10_GKK10
Be2Li_82GPaphonono_DS10_GKK11
Be2Li_82GPaphonono_DS10_GKK12
Be2Li_82GPaphonono_DS10_GKK13
Be2Li_82GPaphonono_DS10_GKK14
Be2Li_82GPaphonono_DS10_GKK15
Be2Li_82GPaphonono_DS10_GKK16
Be2Li_82GPaphonono_DS10_GKK17
Be2Li_82GPaphonono_DS10_GKK18
Be2Li_82GPaphonono_DS11_GKK1 # DS11
Be2Li_82GPaphonono_DS11_GKK2
Be2Li_82GPaphonono_DS11_GKK3
Be2Li_82GPaphonono_DS11_GKK4
Be2Li_82GPaphonono_DS11_GKK5
Be2Li_82GPaphonono_DS11_GKK6
Be2Li_82GPaphonono_DS11_GKK7
Be2Li_82GPaphonono_DS11_GKK8
Be2Li_82GPaphonono_DS11_GKK9
Be2Li_82GPaphonono_DS11_GKK10
Be2Li_82GPaphonono_DS11_GKK11
Be2Li_82GPaphonono_DS11_GKK12
Be2Li_82GPaphonono_DS11_GKK13
Be2Li_82GPaphonono_DS11_GKK14
Be2Li_82GPaphonono_DS11_GKK15
Be2Li_82GPaphonono_DS11_GKK16
Be2Li_82GPaphonono_DS11_GKK17
Be2Li_82GPaphonono_DS11_GKK18
Be2Li_82GPaphonono_DS12_GKK1 # DS12
Be2Li_82GPaphonono_DS12_GKK2
Be2Li_82GPaphonono_DS12_GKK3
Be2Li_82GPaphonono_DS12_GKK4
Be2Li_82GPaphonono_DS12_GKK5
Be2Li_82GPaphonono_DS12_GKK6
Be2Li_82GPaphonono_DS12_GKK7
Be2Li_82GPaphonono_DS12_GKK8
Be2Li_82GPaphonono_DS12_GKK9
Be2Li_82GPaphonono_DS12_GKK10
Be2Li_82GPaphonono_DS12_GKK11
Be2Li_82GPaphonono_DS12_GKK12
Be2Li_82GPaphonono_DS12_GKK13
Be2Li_82GPaphonono_DS12_GKK14
Be2Li_82GPaphonono_DS12_GKK15
Be2Li_82GPaphonono_DS12_GKK16
Be2Li_82GPaphonono_DS12_GKK17
Be2Li_82GPaphonono_DS12_GKK18
Be2Li_82GPaphonono_DS13_GKK1 # DS13
Be2Li_82GPaphonono_DS13_GKK2
Be2Li_82GPaphonono_DS13_GKK3
Be2Li_82GPaphonono_DS13_GKK4
Be2Li_82GPaphonono_DS13_GKK5
Be2Li_82GPaphonono_DS13_GKK6
Be2Li_82GPaphonono_DS13_GKK7
Be2Li_82GPaphonono_DS13_GKK8
Be2Li_82GPaphonono_DS13_GKK9
Be2Li_82GPaphonono_DS13_GKK10
Be2Li_82GPaphonono_DS13_GKK11
Be2Li_82GPaphonono_DS13_GKK12
Be2Li_82GPaphonono_DS13_GKK13
Be2Li_82GPaphonono_DS13_GKK14
Be2Li_82GPaphonono_DS13_GKK15
Be2Li_82GPaphonono_DS13_GKK16
Be2Li_82GPaphonono_DS13_GKK17
Be2Li_82GPaphonono_DS13_GKK18
Be2Li_82GPaphonono_DS14_GKK1 # DS14
Be2Li_82GPaphonono_DS14_GKK2
Be2Li_82GPaphonono_DS14_GKK3
Be2Li_82GPaphonono_DS14_GKK4
Be2Li_82GPaphonono_DS14_GKK5
Be2Li_82GPaphonono_DS14_GKK6
Be2Li_82GPaphonono_DS14_GKK7
Be2Li_82GPaphonono_DS14_GKK8
Be2Li_82GPaphonono_DS14_GKK9
Be2Li_82GPaphonono_DS14_GKK10
Be2Li_82GPaphonono_DS14_GKK11
Be2Li_82GPaphonono_DS14_GKK12
Be2Li_82GPaphonono_DS14_GKK13
Be2Li_82GPaphonono_DS14_GKK14
Be2Li_82GPaphonono_DS14_GKK15
Be2Li_82GPaphonono_DS14_GKK16
Be2Li_82GPaphonono_DS14_GKK17
Be2Li_82GPaphonono_DS14_GKK18
Be2Li_82GPaphonono_DS15_GKK1 # DS15
Be2Li_82GPaphonono_DS15_GKK2
Be2Li_82GPaphonono_DS15_GKK3
Be2Li_82GPaphonono_DS15_GKK4
Be2Li_82GPaphonono_DS15_GKK5
Be2Li_82GPaphonono_DS15_GKK6
Be2Li_82GPaphonono_DS15_GKK7
Be2Li_82GPaphonono_DS15_GKK8
Be2Li_82GPaphonono_DS15_GKK9
Be2Li_82GPaphonono_DS15_GKK10
Be2Li_82GPaphonono_DS15_GKK11
Be2Li_82GPaphonono_DS15_GKK12
Be2Li_82GPaphonono_DS15_GKK13
Be2Li_82GPaphonono_DS15_GKK14
Be2Li_82GPaphonono_DS15_GKK15
Be2Li_82GPaphonono_DS15_GKK16
Be2Li_82GPaphonono_DS15_GKK17
Be2Li_82GPaphonono_DS15_GKK18
Be2Li_82GPaphonono_DS16_GKK1 # DS16
Be2Li_82GPaphonono_DS16_GKK2
Be2Li_82GPaphonono_DS16_GKK3
Be2Li_82GPaphonono_DS16_GKK4
Be2Li_82GPaphonono_DS16_GKK5
Be2Li_82GPaphonono_DS16_GKK6
Be2Li_82GPaphonono_DS16_GKK7
Be2Li_82GPaphonono_DS16_GKK8
Be2Li_82GPaphonono_DS16_GKK9
Be2Li_82GPaphonono_DS16_GKK10
Be2Li_82GPaphonono_DS16_GKK11
Be2Li_82GPaphonono_DS16_GKK12
Be2Li_82GPaphonono_DS16_GKK13
Be2Li_82GPaphonono_DS16_GKK14
Be2Li_82GPaphonono_DS16_GKK15
Be2Li_82GPaphonono_DS16_GKK16
Be2Li_82GPaphonono_DS16_GKK17
Be2Li_82GPaphonono_DS16_GKK18


ANADDB analysis files
elphonon.files

Code: Select all

elphonon.in
Be2Li_82GPa_kpt20x20x20_qpt5x5x5_mustar0.10.out
Be2Li_82GPaphonon.ddb.out
moldyn
Be2Li_82GPaphonono_GKK.bin
Be2Li_82GPaaphonon.ep
xxx


elphonon.in

Code: Select all

# turn on calculation of the electron-phonon quantities
elphflag 1

# Path in reciprocal space along which the phonon linewidths
#  and band structure will be calculated
nqpath 7
qpath
0    0    0   #G
1/2  0    0   #M
1/3  1/3  0   #K
0    0    0   #G
0    0    1/2 #A
1/3  1/3  1/2 #H
0    0    0 #G

# Coulomb pseudopotential parameter
mustar 0.1

# Minimalistic qpoint grid
ngqpt 5 5 5

#  impose acoustic sum rule in a symmetric way
asr 2
dipdip 1

#  bravais lattice necessary
brav 1

# qpt grid
nqshft 1
q1shft 0.0 0.0 0.0
#
ifcflag 1
ifcana 1
#  ifc for all atoms?
natifc 0
atifc 1 2 3

#  print dielectric matrix with freq dependence
dieflag 0

#  print out eigenvectors and symmetrize dyn matrix
eivec 1

#Wavevector list number 1 (Reduced coordinates and normalization factor)
nph1l 1
qph1l
              0.00000000E+00  0.00000000E+00  0.00000000E+00 1

# This line added when defaults were changed (v5.3) to keep the previous, old behaviour
  symdynmat 0



if someone can help me to solve the problem or explanation of this difference, i will be glad.
I also attached the phonon bandstructure image. there is positive non-zero band (3th band i think around cm-1) at Gamma which is different from the article.


thank you
Attachments
bs.tif

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