[SOLVED] Abint 6.10.3 fails tests on Ubuntu 11.10 server

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serzz
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[SOLVED] Abint 6.10.3 fails tests on Ubuntu 11.10 server

Post by serzz » Wed Dec 28, 2011 5:25 pm

I have installed Abint 6.10.3 on Ubuntu 11.10 server (2 intel xeon 6-core processors) with OpenMPI in accordance with recomendations http://forum.abinit.org/viewtopic.php?f=2&t=1391 and some modification http://forum.abinit.org/viewtopic.php?f=3&t=1477
no error messager were generated. But

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make testin_1
produce the following output

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echo "Running built-in test in_1"
Running built-in test in_1
cd tests ; /usr/bin/perl .././tests/Scripts/run-basic-tests.pl built-in in_1 /home/serzz/abinit/abinit-6.10.3
*** The MPI_Comm_f2c() function was called before MPI_INIT was invoked.
*** This is disallowed by the MPI standard.
*** Your MPI job will now abort.
[team194:25699] Abort before MPI_INIT completed successfully; not able to guarantee that all other processes were killed!


I also tried to reinstall and recompile with mpich software (OpenMPI was completely removed from the system), but I again the output is

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Running built-in test in_1
cd tests ; /usr/bin/perl .././tests/Scripts/run-basic-tests.pl built-in in_1 /home/serzz/abinit/abinit-6.10.3
Attempting to use an MPI routine before initializing MPICH


could anybody say what may be wrong?

Sergei
Last edited by serzz on Thu Dec 29, 2011 6:55 pm, edited 1 time in total.
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jbeuken
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Re: Abint 6.10.3 fails tests on Ubuntu 10.10 server

Post by jbeuken » Wed Dec 28, 2011 8:49 pm

Hi Sergei,

I'm not a specialist of ubuntu but the 6.10.3 is working with recipe for ubuntu 10.04

can you tell me which version of openmpi was installed under 10.10 ?

under 10.04 , it's 1.4.1 : we don't support yet 1.5
same for mpich : don't use mpich > 1.3.x : there is a bug in version 1.4.x corrected in 1.5.x ( but not yet released under a stable version...)

regards

jmb
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Jean-Michel Beuken
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serzz
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Re: Abint 6.10.3 fails tests on Ubuntu 11.10 server

Post by serzz » Thu Dec 29, 2011 10:38 am

Thank you, mpich is 1.4.1 indeed. As for openMPI, it was 1.4.3. I will try earlier versions.
Last edited by serzz on Thu Dec 29, 2011 6:56 pm, edited 1 time in total.
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Re: Abint 6.10.3 fails tests on Ubuntu 11.10 server

Post by serzz » Thu Dec 29, 2011 3:39 pm

Finally I decided to instal abinit 6.10.3 on Ubuntu 10.04 server, everything seems to be fine now, thank you for advices!
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