### Parallel builds ### INSTALLATION giving error...

option, parallelism,...

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schopra1980
Posts: 13
Joined: Mon Jan 13, 2014 7:41 am

### Parallel builds ### INSTALLATION giving error...

Post by schopra1980 » Mon Jan 13, 2014 7:52 am

Dear All,
I am new to ABINIT on Linux. I installed the version 7.4.3. using PARALLEL BUILDS.. <n>=4 was used. I am getting the following error:

==============================================================================
=== Multicore architecture support ===
==============================================================================

checking whether to enable OpenMP support... no
checking whether to build MPI code... yes
checking whether the C compiler supports MPI... no
checking whether the C++ compiler supports MPI... no
checking whether the Fortran Compiler supports MPI... no
checking whether MPI is usable... no
configure: error: MPI support is broken - please fix your config parameters and/or MPI installation


Then while running an input file using "mpirun -np 4 /usr/local/bin/abinit < graphaa.files>& graphaa.output", I am getting the following error::

At line 112 of file inpspheads.F90 (unit = 9, file = 'fort.9')
Fortran runtime error: End of file


Also,
-instrng : 91 lines of input have been read from file /home/sid/Desktop/1/graphaa


iofn2 : Please give name of formatted atomic psp file
iofn2 : for atom type 1 , psp file is /home/sid/Desktop/1/H.psf

iofn2 : Please give name of formatted atomic psp file
iofn2 : for atom type 2 , psp file is /home/sid/Desktop/1/C.psf


Please help me with what is going..
Dr. Siddheshwar chopra,
M.Sc., Ph.D (Physics)
Assistant Professor (Physics),
Amity University, Noida, India.

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jbeuken
Posts: 365
Joined: Tue Aug 18, 2009 9:24 pm
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Re: ### Parallel builds ### INSTALLATION giving error...

Post by jbeuken » Wed Jan 15, 2014 11:28 pm

HI,

checking whether MPI is usable... no


MPI isn't usable then I can't use mpirun

what is your configure command ?

jmb
------
Jean-Michel Beuken
Computer Scientist

schopra1980
Posts: 13
Joined: Mon Jan 13, 2014 7:41 am

Re: ### Parallel builds ### INSTALLATION giving error...

Post by schopra1980 » Tue Jan 28, 2014 8:42 am

Dear Sir,
I am attaching the config.log file here.
The following error creeps in:

required = MPI_THREAD_SINGLE
1
Error: Symbol 'mpi_thread_single' at (1) has no IMPLICIT type
make[3]: *** [m_xmpi.o] Error 1
make[3]: Leaving directory `/usr/local/lib/abinit-7.6.1/src/12_hide_mpi'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/usr/local/lib/abinit-7.6.1/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/usr/local/lib/abinit-7.6.1'
make: *** [all] Error 2

Sir, I used the following configure command:
./configure --enable-mpi --enable-openmp --enable-mpi-fft --enable-mpi-io --enable-mpi-trace --with-mpi-prefix=/usr/lib/mpich

I hve installed all "OPENMPI", MPICH and MPICH2 through synaptic... I am unsure about openmpi version. I tried first with openmpi, but it gave some problems and so I moved onto MPICH. It worked/configured ABINIT very well. But during make gave me the above error.
Sir I have a i3 processor with 2.2 GHz, 2GB RAM, 500GB HDD, with 32 bit Linux mint 15. Can I enable 64 bit support on my 32 bit OS? Will it boost the computation speeds keeping in mind my laptop configuration?
Thanks in advance.
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config.log
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Dr. Siddheshwar chopra,
M.Sc., Ph.D (Physics)
Assistant Professor (Physics),
Amity University, Noida, India.

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pouillon
Posts: 651
Joined: Wed Aug 19, 2009 10:08 am
Location: Spain
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Re: ### Parallel builds ### INSTALLATION giving error...

Post by pouillon » Thu Jan 30, 2014 1:38 pm

Please open only one thread per question and see my answer in the following thread: viewtopic.php?f=3&t=2387
Yann Pouillon
Simune Atomistics
Donostia-San Sebastián, Spain

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