Dear all,
I successfuly complied the abinit-7.10.5 MPI version using intel-2013 compiler(with FC=mpf90 and CC=mpicc). There is no error in compilation.
I check and run it in login node, it runs nicely without any problem. However, if I run interactively or submit job ("sbatch job" in slurm). It does not even produce output file and ends up with error
comp011t
Fatal Error: This program was not built to run in your system.
Please verify that both the operating system and the processor support Intel(R) AVX.
I have no problem in setting job file for slurm. I used module intel/13.0 and openmpi which I also provide in job file. I tried intel/2015 to compile and run it in the same way. But, I am getting similar error.
Did anyone have a similar problem before. I would appreciate for your comment.
Thanks,
Churna
Problem running abinit-7.10.5 in Slurm cluster [SOLVED]
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Please have a look at ~abinit/doc/config/build-config.ac in the source package for detailed and up-to-date information about the configuration of Abinit 8 builds.
For a video explanation on how to build Abinit 7.x for Linux, please go to: http://www.youtube.com/watch?v=DppLQ-KQA68.
IMPORTANT: when an answer solves your problem, please check the little green V-like button on its upper-right corner to accept it.
Please have a look at ~abinit/doc/config/build-config.ac in the source package for detailed and up-to-date information about the configuration of Abinit 8 builds.
For a video explanation on how to build Abinit 7.x for Linux, please go to: http://www.youtube.com/watch?v=DppLQ-KQA68.
IMPORTANT: when an answer solves your problem, please check the little green V-like button on its upper-right corner to accept it.
Re: Problem running abinit-7.10.5 in Slurm cluster
Hi,
The CPU you have on the login node does not seem to be the same as the one you have on the computation nodes.
Don't compile abinit with -xHost (which is I think a default option when using basic optimization and intel compiler)
add
FCFLAGS_OPTIM="-O2"
when you configure abinit
Cheers
The CPU you have on the login node does not seem to be the same as the one you have on the computation nodes.
Don't compile abinit with -xHost (which is I think a default option when using basic optimization and intel compiler)
add
FCFLAGS_OPTIM="-O2"
when you configure abinit
Cheers
Re: Problem running abinit-7.10.5 in Slurm cluster
Hi,
Thanks, I am glad it works now.
Best,
Churna
Thanks, I am glad it works now.
Best,
Churna