Page 1 of 1

Problem with v6.6.3 installation

Posted: Wed Jun 22, 2011 1:57 am
by albayrouni
Hi evey body
I wan to install the last version of abinit which is v6.6.3 on SUSE 11.1, but I have some problems. When I write ./configure, I received this message :
checking whether to build the ATOMPAW fallback... yes
checking for a source tarball of BIGDFT... yes
configure: WARNING: tarball MD5 check failed
configure: downloading BIGDFT - this may take a while
configure: WARNING: tarball MD5 check failed
configure: WARNING: could not download BIGDFT fallback tarball

+--------------------------------------------------------------+
| Fallback availability failure |
+--------------------------------------------------------------+
| The build system of Abinit has not been able to download |
| one or more required external packages. An unstable or |
| absent connection to internet of this computer is the most |
| probable culprit. This means that the build cannot |
| proceed, and the configure script will thus abort now with |
| an error. |
| |
| To address this issue, you may: |
| |
| * use pre-compiled versions of the external packages, |
| through the --with-*-bins, --with-*-incs, and |
| --with-*-libs options of configure; please see |
| the section associated to connectors in |
| ~abinit/doc/config/build-config.ac for available |
| options and details; |
| |
| * manually upload the source tarballs to a dedicated |
| directory, either ~/.abinit/tarballs/ (the default) or |
| any directory of your choice; please see the section |
| associated to fallbacks in |
| ~abinit/doc/config/build-config.ac for details; |
| |
| * disable the corresponding extensions, by using the |
| following options of configure: |
| --with-dft-flavor="none"; |
| --with-trio-flavor="none"; |
| please see the section associated to connectors in |
| ~abinit/doc/config/build-config.ac for details. |
| |
+--------------------------------------------------------------+

configure: error: cannot build Abinit - aborting
*I tried to install manually BIGDFT fallback (I have uploaded it from the site) on a directory that I named tarballs. But I still have problems when I tried to 'make' it :
make all-recursive
make[1]: entrant dans le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2 »
Making all in src
make[2]: entrant dans le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2/src »
Making all in modules
make[3]: entrant dans le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2/src/modules »
gfortran -I. -I. -g -O2 -c -o base.o base.f90
Error: Can't open included file 'mpif.h'
base.f90:27.53:

integer, parameter :: mpidtypw=MPI_DOUBLE_PRECISION,mpidtypd=MPI_DOUBLE_PRECI
1
Error: Symbol 'mpi_double_precision' at (1) has no IMPLICIT type
base.f90:28.53:

integer, parameter :: mpidtypg=MPI_DOUBLE_PRECISION
1
Error: Symbol 'mpi_double_precision' at (1) has no IMPLICIT type
make[3]: *** [base.o] Erreur 1
make[3]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2/src/modules »
make[2]: *** [all-recursive] Erreur 1
make[2]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2/src »
make[1]: *** [all-recursive] Erreur 1
make[1]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/tarballs/bigdft-1.2.0.2 »
make: *** [all] Erreur 2
Can you please help me.

Re: Problem with v6.6.3 installation

Posted: Wed Jun 22, 2011 12:45 pm
by pouillon
This is a transient error.

Just reconfigure with the following option for now:

Code: Select all

--with-dft-flavor="atompaw+libxc+wannier90"

Re: Problem with v6.6.3 installation

Posted: Fri Jun 24, 2011 12:16 am
by albayrouni
Thank you sir for the answer. I have successfully configurated abinit, but when I type 'make', i received this message :
make[3]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/src/52_fft_mpi_noabirule »
Making all in 53_abiutil
make[3]: entrant dans le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/src/53_abiutil »
gfortran -DHAVE_CONFIG_H -I. -I../.. -I../../src/incs -I../../src/incs -I/home/neila/Desktop/neila/abinit-6.6.3/plugins/netcdf -ffree-form -J/home/neila/Desktop/neila/abinit-6.6.3/src/mods -O2 -mtune=native -march=native -mfpmath=sse -g -ffree-line-length-none -c -o m_blas.o m_blas.F90
m_blas.F90:371: erreur: replacements/cdotc.f : Aucun fichier ou dossier de ce type
m_blas.F90:372: erreur: replacements/zdotc.f : Aucun fichier ou dossier de ce type
m_blas.F90:377: erreur: replacements/cdotu.f : Aucun fichier ou dossier de ce type
m_blas.F90:378: erreur: replacements/zdotu.f : Aucun fichier ou dossier de ce type
make[3]: *** [m_blas.o] Erreur 1
make[3]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/src/53_abiutil »
make[2]: *** [all-recursive] Erreur 1
make[2]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3/src »
make[1]: *** [all-recursive] Erreur 1
make[1]: quittant le répertoire « /home/neila/Desktop/neila/abinit-6.6.3 »
make: *** [all] Erreur 2
I need your help please.

Re: Problem with v6.6.3 installation

Posted: Mon Jun 27, 2011 11:21 am
by pouillon
Then, there might be a problem with the source tarball, because this should not happen. You could download it again and try recompiling from scratch.

Checking that the whole compilation toolchain is properly installed could be a good idea as well.