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help for install Abinitgui
Posted: Tue Aug 26, 2014 8:57 am
by moones
Dear all users
i'm trying install Abinitgui
in the 6th stage of the installation python_install.txt:
6) Setup configuration file $HOME/.abinit/abipy/abipyrc
I do not understand what should I do?
can you help me?
thanks a lot
Re: help for install Abinitgui
Posted: Tue Aug 26, 2014 10:54 am
by ygillet
Dear moones,
You can simply create an empty file at this path : $HOME/.abinit/abipy/abipyrc
Otherwise, in this file, you can specify several configuration options for Abipy. If you want to know more, please refer to the Abipy project.
Thanks for using the GUI
Yannick
Re: help for install Abinitgui
Posted: Wed Dec 10, 2014 12:09 pm
by AndrewStanley
Setup the environment of python for the GUI !
1) Python 2.7
(currently version 2.7.3)
if python is not installed yet, install it with the paquet manager
sudo apt-get install python2.7 python2.7-dev
2) Install PIP (for dependencies)
sudo apt-get install python-pip
2) Install numpy (1:1.6.1), scipy (0.9.0), matplotlib (1.1.1)
sudo apt-get install python-numpy python-scipy python-matplotlib
(Working with scipy 0.12 or scipy 0.9)
Some problems can be encountered with scipy 0.11. Try installing with pip :
sudo pip install scipy
3) Install dependencies :
For pymatgen
sudo pip install pyhull
sudo pip install pybtex (Install also pyYAML...)
sudo pip install PyCifRW
sudo pip install requests
For abipy
sudo apt-get install libhdf5-serial-dev
sudo apt-get install libnetcdf-dev
sudo apt-get install python-netcdf
sudo pip install netCDF4
3) Download pymatgen.tar.gz, abipy.tar.gz
from flavio.be website
4) Untar them
5) Create workdir :
mkdir -p $HOME/workdir/lib/python2.7/site-packages
5) Add workdir to the .bashrc
echo “export PYTHONPATH=$HOME/workdir/lib/python2.7/site-packages/:$PYTHONPATH” >> ~/.bashrc
5) Install pymatgen & abipy in workdir
cd pymatgen
python setup.py install --prefix=$HOME/workdir
cd abipy
python setup.py install --prefix=$HOME/workdir
6) Setup configuration file $HOME/.abinit/abipy/abipyrc (create an empty file if you don't want to use more from abipy)
7) Remove first line of bashrc, which prevents the execution of bashrc when not run interactively …
Re: help for install Abinitgui
Posted: Thu Mar 26, 2015 4:08 pm
by SharrySteve1
Creating a file this one: $HOME/.abinit/abipy/abipyrc might help you get it done.
Thanks for the feedback.
Re: help for install Abinitgui
Posted: Thu Sep 28, 2017 10:30 am
by Crostimare
Oh! I was about to create new topic but saw accidentally that problem is solved here. Cool. Thank you all!