space group

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payam
Posts: 31
Joined: Fri Feb 12, 2010 7:59 pm

space group

Post by payam » Fri Jun 25, 2010 10:59 pm

Hello All
Is there any example or sample file to show how we can use spgroup flag to introduce the structure instead of using rprim,....?
Best regards,Payam Norouzzadeh

gonze
Posts: 412
Joined: Fri Aug 14, 2009 8:29 pm

Re: space group

Post by gonze » Sat Jun 26, 2010 7:26 pm

payam wrote:Is there any example or sample file to show how we can use spgroup flag to introduce the structure instead of using rprim,....?

Many. Try :
cd tests
grep spgroup */Input/*in

X.

payam
Posts: 31
Joined: Fri Feb 12, 2010 7:59 pm

space group and structure

Post by payam » Mon Nov 01, 2010 2:06 am

Hello All

I know the atom positions of the material I am working with and also its space group but there is no
any report about its crystal structure like BCC,FCC or Hexagonal ...
Does anyone know how can I use spgroup instead of rprim?
can I use spgroup to reproduce ideal atom positions instead of using experimental data?

Best regards,Payam Norouzzadeh

hamideh
Posts: 13
Joined: Sat Sep 18, 2010 3:13 pm

Re: space group

Post by hamideh » Mon Nov 01, 2010 7:20 am

hi payam
I think you can use nsym as an input variable in your input file it shows your space group but i advise U to check your xred ...
if you have correct xred & choose a suitable rprim & shiftk your out put shows correct SPgroup.
regards.
hamideh.

payam
Posts: 31
Joined: Fri Feb 12, 2010 7:59 pm

Re: space group

Post by payam » Mon Nov 01, 2010 10:09 pm

Dear Hamide

Thank you for your reply.
Actually I am using experimental data in xred. Also I use rprim for a primitive orthorhombic crystal ( as it is reported in papers) but ABINIT recognizes it as a primitive triclinic with a different space group.How can I fix it?
I will be thankful if you help me.

Best regards,Payam Norouzzadeh

payam
Posts: 31
Joined: Fri Feb 12, 2010 7:59 pm

space group and atom coordinates

Post by payam » Tue Nov 02, 2010 6:11 am

Hello ABINIT Users
Because of following error I want to change the value of tolerance :
symatm : ERROR -
Largest error (above) is so large (0.01) that either input atomic coordinates (xred)
are wrong or space group symmetry data is wrong.
Action : correct your input file.

How can I do that ?(which flag?) Is it standard way to fix the problem?

Best regards,Payam Norouzzadeh

mina
Posts: 110
Joined: Mon Sep 27, 2010 8:44 am

Re: space group

Post by mina » Wed Nov 03, 2010 11:09 am

Hello,
i think you need tolsym,this flag can change tolerence but i have your problem with space group,and this flag can't solve your problem.
have you used nsym with symrel?do you now how can i find symrel?

payam
Posts: 31
Joined: Fri Feb 12, 2010 7:59 pm

Re: space group

Post by payam » Wed Nov 03, 2010 5:00 pm

Hello Mina
As Prof.Gonze mentioned use the examples in tests folder :
cd tests
grep spgroup */Input/*in

after running relevant example with desired space group you can find symrel and tnons in output file.
Regards,Payam Norouzzadeh

mina
Posts: 110
Joined: Mon Sep 27, 2010 8:44 am

Re: space group

Post by mina » Sat Nov 06, 2010 9:02 am

Hi payam,
thankyou for your attention,but i can't underestant your mean about how to find symrel,can i ask you tell me about this more?

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