:orphan:
.. _flow-gallery:
Flow Gallery
============
This gallery contains python scripts to generate AbiPy flows from the command line.
Run the scripts to generate the directory with the flow, then use the :ref:`abirun.py` script to execute the flow.
Alternatively, one can use the ``-s`` option to generate the flow and run it immediately with the scheduler.
Use ``--help`` for further information on the available options.
Note that the figures can only show the **initial configuration of the Flow**.
Additional Works generated at runtime won't be displayed.
To visualize the entire Flow, you need to run the script and then use::
abirun.py FLOWDIR graphviz
where `FLOWDIR` is the directory of the Flow.
.. warning::
The following examples show how to use python and the AbiPy API to generate and run
Abinit calculations in a semi-automatic way.
These examples **are not supposed to produce physically meaningful results**
as input parameters are usually underconverged.
.. raw:: html
.. thumbnail-parent-div-open
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_si_ebands_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_si_ebands.py`
.. raw:: html
Band structure flow
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_ht_si_ebands_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_ht_si_ebands.py`
.. raw:: html
Band structure flow with factory functions
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_fe_ebands_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_fe_ebands.py`
.. raw:: html
Band structure w/wo magnetization
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gaas_ebands_soc_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gaas_ebands_soc.py`
.. raw:: html
Band structure with/without SOC
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_ht_si_bsemdf_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_ht_si_bsemdf.py`
.. raw:: html
Bethe-Salpeter flow with factory functions
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_becs_and_epsilon_vs_kpts_new_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_becs_and_epsilon_vs_kpts_new.py`
.. raw:: html
Born effective charges and dielectric tensors with DFPT
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_conducwork_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_conducwork.py`
.. raw:: html
Conductivity in metals
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_mgb2_phonons_nkpt_tsmear_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_mgb2_phonons_nkpt_tsmear.py`
.. raw:: html
Convergence of phonons in metals wrt ngkpt and tsmear
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_mgb2_edoses_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_mgb2_edoses.py`
.. raw:: html
Convergence studies of e-DOS wrt ngkpt
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gs_vs_kpts_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gs_vs_kpts.py`
.. raw:: html
Convergence study with different k-meshes
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_lumi_Eu_doped_SLA_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_lumi_Eu_doped_SLA.py`
.. raw:: html
Delta SCF calculation: luminescence of an Eu-doped phosphor
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_lumi_NV_center_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_lumi_NV_center.py`
.. raw:: html
Delta SCF calculation: luminescence of the NV- center in diamond
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_effmass_dfpt_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_effmass_dfpt.py`
.. raw:: html
Effective masses with DFPT
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_effmass_finitediff_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_effmass_finitediff.py`
.. raw:: html
Effective masses with finite difference
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_elastic_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_elastic.py`
.. raw:: html
Elastic constants and piezoelectric tensor with DFPT
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_eos_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_eos.py`
.. raw:: html
Equation of state
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_flexoelectric_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_flexoelectric.py`
.. raw:: html
Flexoelectric Tensor
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_qha_2d_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_qha_2d.py`
.. raw:: html
Flow for QHA calculations with two DOFs
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_qha_zsisa_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_qha_zsisa.py`
.. raw:: html
Flow for ZSISA calculations
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_qha_vzsisa_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_qha_vzsisa.py`
.. raw:: html
Flow for v-ZSISA-QHA calculations
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gwconv_ecuteps_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gwconv_ecuteps.py`
.. raw:: html
G0W0 convergence study
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_si_g0w0_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_si_g0w0.py`
.. raw:: html
G0W0 flow with convergence study wrt nband
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_ht_si_g0w0ppm_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_ht_si_g0w0ppm.py`
.. raw:: html
G0W0 flow with factory functions
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gwr_g0w0_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gwr_g0w0.py`
.. raw:: html
GWR flow with convergence studies
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gruneisen_abinit_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gruneisen_abinit.py`
.. raw:: html
Gruneisen parameters with DFPT phonons and finite difference
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_eph_al_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_eph_al.py`
.. raw:: html
Isotropic superconductivity
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_ldaus_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_ldaus.py`
.. raw:: html
KS + U calculations
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_nonlinear_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_nonlinear.py`
.. raw:: html
Non-linear optical properties with DFPT
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_optic_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_optic.py`
.. raw:: html
Optic Flow
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_eph_mob_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_eph_mob.py`
.. raw:: html
Phonon-limited mobilities in semiconductors
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_phonons_with_quad_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_phonons_with_quad.py`
.. raw:: html
Phonons + dynamical quadrupoles
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_phonons_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_phonons.py`
.. raw:: html
Phonons with DFPT
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_phonons_wkq_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_phonons_wkq.py`
.. raw:: html
Phonons with WFQ files (q-mesh denser than k-mesh)
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_phonopy_si_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_phonopy_si.py`
.. raw:: html
Phonopy with AbiPy flow
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_raman_bse_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_raman_bse.py`
.. raw:: html
Raman with BSE and frozen phonon
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_raman_optic_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_raman_optic.py`
.. raw:: html
Raman with independent-particle approximation (optic)
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_relax_and_ebands_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_relax_and_ebands.py`
.. raw:: html
Relaxation + bands
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_relax_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_relax.py`
.. raw:: html
Relaxation flow
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_sic_relax_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_sic_relax.py`
.. raw:: html
Relaxation flow
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_relax_vs_kpts_tsmear_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_relax_vs_kpts_tsmear.py`
.. raw:: html
Relaxation of Al with different k-meshes and tsmear
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_relax_vs_kpts_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_relax_vs_kpts.py`
.. raw:: html
Relaxation with different k-meshes
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_from_files_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_from_files.py`
.. raw:: html
Starting a Flow from external files
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_phfrozen_ebands_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_phfrozen_ebands.py`
.. raw:: html
e-Bands with frozen phonon
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_frohlich_zpr_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_frohlich_zpr.py`
.. raw:: html
e-ph ZPR at the band edges with the generalized Frohlich model
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_frohlich_zpr_from_ddb_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_frohlich_zpr_from_ddb.py`
.. raw:: html
e-ph ZPR of band edges with generalized Frohlich model
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_gkq_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_gkq.py`
.. raw:: html
e-ph matrix elements along a q-path
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_eph_qpath_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_eph_qpath.py`
.. raw:: html
e-ph matrix elements along q-path
.. raw:: html
.. only:: html
.. image:: /flow_gallery/images/thumb/sphx_glr_run_eph_pot_thumb.png
:alt:
:ref:`sphx_glr_flow_gallery_run_eph_pot.py`
.. raw:: html
e-ph scattering potentials
.. thumbnail-parent-div-close
.. raw:: html
.. toctree::
:hidden:
/flow_gallery/run_si_ebands
/flow_gallery/run_ht_si_ebands
/flow_gallery/run_fe_ebands
/flow_gallery/run_gaas_ebands_soc
/flow_gallery/run_ht_si_bsemdf
/flow_gallery/run_becs_and_epsilon_vs_kpts_new
/flow_gallery/run_conducwork
/flow_gallery/run_mgb2_phonons_nkpt_tsmear
/flow_gallery/run_mgb2_edoses
/flow_gallery/run_gs_vs_kpts
/flow_gallery/run_lumi_Eu_doped_SLA
/flow_gallery/run_lumi_NV_center
/flow_gallery/run_effmass_dfpt
/flow_gallery/run_effmass_finitediff
/flow_gallery/run_elastic
/flow_gallery/run_eos
/flow_gallery/run_flexoelectric
/flow_gallery/run_qha_2d
/flow_gallery/run_qha_zsisa
/flow_gallery/run_qha_vzsisa
/flow_gallery/run_gwconv_ecuteps
/flow_gallery/run_si_g0w0
/flow_gallery/run_ht_si_g0w0ppm
/flow_gallery/run_gwr_g0w0
/flow_gallery/run_gruneisen_abinit
/flow_gallery/run_eph_al
/flow_gallery/run_ldaus
/flow_gallery/run_nonlinear
/flow_gallery/run_optic
/flow_gallery/run_eph_mob
/flow_gallery/run_phonons_with_quad
/flow_gallery/run_phonons
/flow_gallery/run_phonons_wkq
/flow_gallery/run_phonopy_si
/flow_gallery/run_raman_bse
/flow_gallery/run_raman_optic
/flow_gallery/run_relax_and_ebands
/flow_gallery/run_relax
/flow_gallery/run_sic_relax
/flow_gallery/run_relax_vs_kpts_tsmear
/flow_gallery/run_relax_vs_kpts
/flow_gallery/run_from_files
/flow_gallery/run_phfrozen_ebands
/flow_gallery/run_frohlich_zpr
/flow_gallery/run_frohlich_zpr_from_ddb
/flow_gallery/run_gkq
/flow_gallery/run_eph_qpath
/flow_gallery/run_eph_pot
.. only:: html
.. container:: sphx-glr-footer sphx-glr-footer-gallery
.. container:: sphx-glr-download sphx-glr-download-python
:download:`Download all examples in Python source code: flow_gallery_python.zip `
.. container:: sphx-glr-download sphx-glr-download-jupyter
:download:`Download all examples in Jupyter notebooks: flow_gallery_jupyter.zip `
.. only:: html
.. rst-class:: sphx-glr-signature
`Gallery generated by Sphinx-Gallery