Source code for abipy.abio.timer

This module provides objects for extracting timing data from the ABINIT output files
It also provides tools to analyze and to visualize the parallel efficiency.
from abipy.core.mixins import NotebookWriter
from abipy.flowtk import AbinitTimerParser as _Parser

[docs]class AbinitTimerParser(_Parser, NotebookWriter):
[docs] def yield_figs(self, **kwargs): # pragma: no cover """ This function *generates* a predefined list of matplotlib figures with minimal input from the user. """ yield self.plot_stacked_hist(show=False) yield self.plot_efficiency(show=False) yield self.plot_efficiency(show=False) yield self.plot_pie(show=False)
[docs] def write_notebook(self, nbpath=None): """ Write an ipython notebook to nbpath. If nbpath is None, a temporary file in the current working directory is created. Return path to the notebook. """ nbformat, nbv, nb = self.get_nbformat_nbv_nb(title=None) filenames = self.filenames nb.cells.extend([ nbv.new_code_cell("parser = abilab.AbinitTimerParser()\nparser.parse(%s)" % str(filenames)), nbv.new_code_cell("display(parser.summarize())"), nbv.new_markdown_cell("# This is a markdown cell"), nbv.new_code_cell("parser.plot_stacked_hist();"), nbv.new_code_cell("parser.plot_efficiency(what='good', nmax=5);"), nbv.new_code_cell("parser.plot_efficiency(what='bad', nmax=5);"), nbv.new_markdown_cell("# This is a markdown cell"), nbv.new_code_cell("parser.plot_pie();"), nbv.new_code_cell("""\ for timer in parser.timers(): print(timer) display(timer.get_dataframe())"""), ]) return self._write_nb_nbpath(nb, nbpath)