Index

A

A2f (class in abipy.eph.a2f) a2f_qcoarse() (abipy.eph.a2f.A2fFile method) a2f_qintp() (abipy.eph.a2f.A2fFile method) A2fFile (class in abipy.eph.a2f) A2fReader (class in abipy.eph.a2f) A2fRobot (class in abipy.eph.a2f) A2Ftr (class in abipy.eph.a2f) a2ftr_qcoarse() (abipy.eph.a2f.A2fFile method) a2ftr_qintp() (abipy.eph.a2f.A2fFile method) abi_extensions() (in module abipy.flowtk.utils) abi_primitive() (abipy.core.structure.Structure method) abi_sanitize() (abipy.core.structure.Structure method) abi_spacegroup() (abipy.core.structure.Structure property) abi_splitext() (in module abipy.flowtk.utils) abi_string() (abipy.core.structure.Structure property) AbiAbstractInput (class in abipy.abio.inputs) abicheck() (in module abipy.abilab) abifile_subclass_from_filename() (in module abipy.abilab) abifiles() (abipy.abio.robots.Robot property) abiget_autoparal_pconfs() (abipy.abio.inputs.AbinitInput method) abiget_ibz() (abipy.abio.inputs.AbinitInput method) abiget_irred_ddeperts() (abipy.abio.inputs.AbinitInput method) abiget_irred_dteperts() (abipy.abio.inputs.AbinitInput method) abiget_irred_phperts() (abipy.abio.inputs.AbinitInput method) abiget_irred_strainperts() (abipy.abio.inputs.AbinitInput method) abiget_scr_ibz() (abipy.abio.inputs.AbinitInput method) abiget_spacegroup() (abipy.abio.inputs.AbinitInput method) abiget_spginfo() (abipy.core.structure.Structure method) abinb_mkstemp() (in module abipy.core.globals) abinit_build() (abipy.flowtk.tasks.TaskManager method) abinit_help() (in module abipy.abio.abivars_db) abinit_to_phonopy() (in module abipy.dfpt.converters) abinit_version() (abipy.core.mixins.AbinitNcFile method) AbinitBuild (class in abipy.flowtk.tasks) AbinitInput (class in abipy.abio.inputs) AbinitInputDecorator (class in abipy.abio.decorators) AbinitInputError AbinitInputFile (class in abipy.abio.abivars) AbinitInputParser (class in abipy.abio.abivars) AbinitLogFile (class in abipy.abio.outputs) AbinitNcFile (class in abipy.core.mixins) AbinitOutputFile (class in abipy.abio.outputs) AbinitOutputFilePanel (class in abipy.panels.outputs) AbinitOutputFilePanelWithFileInput (class in abipy.panels.outputs) AbinitSpaceGroup (class in abipy.core.symmetries) AbinitTask (class in abipy.flowtk.tasks) AbinitTaskMockedStart (class in abipy.flowtk.mocks) AbinitTaskPanel (class in abipy.panels.tasks) AbinitTextFile (class in abipy.abio.outputs) AbinitTimerParser (class in abipy.abio.timer) abiopen() (abipy.flowtk.nodes.FileNode method) (in module abipy.abilab) abiopen_ext2class_table() (in module abipy.abilab) abipanel() (in module abipy.abilab) (in module abipy.panels.core) abipy.abilab module abipy.abio module abipy.abio.abivars module abipy.abio.abivars_db module abipy.abio.decorators module abipy.abio.factories module abipy.abio.input_tags module abipy.abio.inputs module abipy.abio.outputs module abipy.abio.robots module abipy.abio.timer module abipy.abio.variable module abipy.core module abipy.core.abinit_units module abipy.core.fields module abipy.core.func1d module abipy.core.globals module abipy.core.gsphere module abipy.core.irrepsdb module abipy.core.kpoints module abipy.core.mesh3d module abipy.core.mixins module abipy.core.restapi module abipy.core.site_symmetries module abipy.core.skw module abipy.core.structure module abipy.core.symmetries module abipy.core.testing module abipy.data module abipy.dfpt module abipy.dfpt.anaddbnc module abipy.dfpt.converters module abipy.dfpt.ddb module abipy.dfpt.elastic module abipy.dfpt.frozen_phonons module abipy.dfpt.gruneisen module abipy.dfpt.ifc module abipy.dfpt.msqdos module abipy.dfpt.phonons module abipy.dfpt.phtk module abipy.dfpt.qha module abipy.dfpt.raman module abipy.dfpt.vsound module abipy.display module abipy.display.mvtk module abipy.display.utils module abipy.dynamics module abipy.dynamics.hist module abipy.electrons module abipy.electrons.bse module abipy.electrons.charges module abipy.electrons.denpot module abipy.electrons.ebands module abipy.electrons.effmass_analyzer module abipy.electrons.eskw module abipy.electrons.fatbands module abipy.electrons.fold2bloch module abipy.electrons.gsr module abipy.electrons.gw module abipy.electrons.lobster module abipy.electrons.optic module abipy.electrons.psps module abipy.electrons.scissors module abipy.electrons.scr module abipy.eph module abipy.eph.a2f module abipy.eph.common module abipy.eph.eph_plotter module abipy.eph.rta module abipy.eph.sigeph module abipy.eph.transportfile module abipy.eph.v1sym module abipy.eph.wr module abipy.flowtk module abipy.flowtk.abiinspect module abipy.flowtk.abiobjects module abipy.flowtk.abiphonopy module abipy.flowtk.abitimer module abipy.flowtk.dfpt_works module abipy.flowtk.effmass_works module abipy.flowtk.eph_flows module abipy.flowtk.events module abipy.flowtk.flows module abipy.flowtk.gruneisen module abipy.flowtk.gs_works module abipy.flowtk.gw module abipy.flowtk.launcher module abipy.flowtk.lumi_works module abipy.flowtk.mocks module abipy.flowtk.netcdf module abipy.flowtk.nodes module abipy.flowtk.pseudos module abipy.flowtk.qadapters module abipy.flowtk.qha module abipy.flowtk.qjobs module abipy.flowtk.qutils module abipy.flowtk.tasks module

abipy.flowtk.utils module abipy.flowtk.works module abipy.flowtk.wrappers module abipy.iotools module abipy.iotools.visualizer module abipy.iotools.xsf module abipy.panels module abipy.panels.core module abipy.panels.ddb module abipy.panels.fatbands module abipy.panels.flows module abipy.panels.gsr module abipy.panels.hist module abipy.panels.outputs module abipy.panels.phonons module abipy.panels.structure module abipy.panels.tasks module abipy.panels.works module abipy.tools module abipy.tools.bessel module abipy.tools.decorators module abipy.tools.derivatives module abipy.tools.devtools module abipy.tools.duck module abipy.tools.fftprof module abipy.tools.iotools module abipy.tools.notebooks module abipy.tools.numtools module abipy.tools.plotting module abipy.tools.tensors module abipy.tools.text module abipy.wannier90 module abipy.wannier90.abiwan module abipy.wannier90.win module abipy.wannier90.wout module abipy.waves module abipy.waves.pwwave module abipy.waves.wfkfile module abipy_logo1() (in module abipy.abilab) abipy_logo2() (in module abipy.abilab) abipy_logo3() (in module abipy.abilab) AbipyParameterized (class in abipy.panels.core) AbipyTest (class in abipy.core.testing) AbipyTest.SkipTest abirobot() (in module abipy.abilab) abivalidate() (abipy.abio.inputs.AbiAbstractInput method) (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.AnaddbInput method) (abipy.abio.inputs.OpticInput method) abivalidate_flow() (abipy.core.testing.AbipyTest static method) abivalidate_input() (abipy.core.testing.AbipyTest static method) abivalidate_inputs() (abipy.flowtk.flows.Flow method) abivalidate_multi() (abipy.core.testing.AbipyTest static method) abivalidate_work() (abipy.core.testing.AbipyTest method) AbiwanFile (class in abipy.wannier90.abiwan) AbiwanReader (class in abipy.wannier90.abiwan) AbiwanRobot (class in abipy.wannier90.abiwan) ABO3() (abipy.core.structure.Structure class method) AboRobot (class in abipy.abio.outputs) abs() (abipy.core.func1d.Function1D method) AbstractInput (class in abipy.abio.inputs) AbstractQHA (class in abipy.dfpt.qha) AbstractQmeshAnalyzer (class in abipy.dfpt.qha) accepted_basis_sets (abipy.electrons.lobster.LobsterInput attribute) acoustic_debye_temp() (abipy.dfpt.gruneisen.GrunsNcFile property) acoustic_indices() (abipy.dfpt.phonons.PhononBands method) ActiveBar (class in abipy.panels.core) add_abiobjects() (abipy.abio.inputs.AbiAbstractInput method) add_array() (abipy.tools.plotting.ArrayPlotter method) add_arrays() (abipy.tools.plotting.ArrayPlotter method) add_comment() (abipy.flowtk.launcher.ScriptEditor method) add_data_ddb() (in module abipy.dfpt.converters) add_deps() (abipy.flowtk.nodes.Node method) add_ebands() (abipy.electrons.ebands.ElectronBandsPlotter method) add_ebands_task_to_work() (abipy.flowtk.tasks.ScfTask method) add_edos() (abipy.electrons.ebands.ElectronDosPlotter method) add_emptyline() (abipy.flowtk.launcher.ScriptEditor method) add_entry() (abipy.core.restapi.DatabaseStructures method) add_error() (abipy.flowtk.tasks.ParalHintsParser method) add_extfile_of_node() (abipy.abio.robots.Robot method) add_file() (abipy.abio.robots.Robot method) (abipy.tools.plotting.GenericDataFilesPlotter method) add_filechild() (abipy.flowtk.nodes.FileNode method) add_flow() (abipy.flowtk.launcher.PyFlowScheduler method) add_line() (abipy.flowtk.launcher.ScriptEditor method) add_lines() (abipy.flowtk.launcher.ScriptEditor method) add_mdf() (abipy.electrons.bse.MdfPlotter method) add_mdf_file() (abipy.electrons.bse.MultipleMdfPlotter method) add_periodic_replicas() (in module abipy.tools.numtools) add_phbands() (abipy.dfpt.phonons.PhononBandsPlotter method) add_phdos() (abipy.dfpt.phonons.PhononDosPlotter method) add_phonon_works_and_build() (abipy.flowtk.gruneisen.GruneisenWork method) add_phonopy_works_and_build() (abipy.flowtk.abiphonopy.PhonopyGruneisenWork method) add_plotter() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.electrons.ebands.ElectronBandsPlotter method) add_tags() (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.MultiDataset method) addnew_from() (abipy.abio.inputs.MultiDataset method) ae_core_density_on_mesh() (abipy.core.fields.Density class method) afm_symmops() (abipy.core.symmetries.AbinitSpaceGroup property) ALL_COMPS (abipy.dfpt.msqdos.MsqDos attribute) all_done() (abipy.flowtk.works.Work property) ALL_ELASTIC_TENSOR_NAMES (abipy.dfpt.elastic.ElasticData attribute) all_have_ibte() (abipy.eph.rta.RtaRobot method) all_ok() (abipy.flowtk.flows.Flow property) ALL_PIEZOELECTRIC_TENSOR_NAMES (abipy.dfpt.elastic.ElasticData attribute) all_qsamps (abipy.eph.a2f.A2fRobot attribute) ALL_STATUS (abipy.flowtk.nodes.Node attribute) all_status_strings() (abipy.flowtk.nodes.Status class method) ALL_TENSOR_NAMES (abipy.dfpt.elastic.ElasticData attribute) all_visunames() (abipy.iotools.visualizer.Visualizer class method) allocate() (abipy.flowtk.flows.Flow method) (abipy.flowtk.works.Work method) allocated() (abipy.flowtk.flows.Flow property) alpha (abipy.electrons.fatbands.FatBandsFile attribute) alternate() (in module abipy.tools.numtools) amu() (abipy.dfpt.anaddbnc.AnaddbNcFile method) amu_symbol() (abipy.dfpt.gruneisen.GrunsNcFile method) anacompare_asr() (abipy.dfpt.ddb.DdbFile method) anacompare_becs() (abipy.dfpt.ddb.DdbRobot method) anacompare_dipdip() (abipy.dfpt.ddb.DdbFile method) anacompare_elastic() (abipy.dfpt.ddb.DdbRobot method) anacompare_eps0() (abipy.dfpt.ddb.DdbRobot method) anacompare_epsinf() (abipy.dfpt.ddb.DdbRobot method) anacompare_phdos() (abipy.dfpt.ddb.DdbFile method) anacompare_quad() (abipy.dfpt.ddb.DdbFile method) anacompare_rifcsph() (abipy.dfpt.ddb.DdbFile method) AnaddbError AnaddbInput (class in abipy.abio.inputs) AnaddbInputError AnaddbNcFile (class in abipy.dfpt.anaddbnc) AnaddbNcRobot (class in abipy.dfpt.anaddbnc) AnaddbTask (class in abipy.flowtk.tasks) anaget_dielectric_tensor_generator() (abipy.dfpt.ddb.DdbFile method) anaget_elastic() (abipy.dfpt.ddb.DdbFile method) anaget_emacro_and_becs() (abipy.dfpt.ddb.DdbFile method) anaget_epsinf_and_becs() (abipy.dfpt.ddb.DdbFile method) anaget_ifc() (abipy.dfpt.ddb.DdbFile method) anaget_interpolated_ddb() (abipy.dfpt.ddb.DdbFile method) anaget_phbst_and_phdos_files() (abipy.dfpt.ddb.DdbFile method) anaget_phmodes_at_qpoint() (abipy.dfpt.ddb.DdbFile method) anaget_phmodes_at_qpoints() (abipy.dfpt.ddb.DdbFile method) anaget_phonon_plotters() (abipy.dfpt.ddb.DdbRobot method) anaget_phonopy_ifc() (abipy.dfpt.ddb.DdbFile method) anaget_raman() (abipy.dfpt.ddb.DdbFile method) angle_tolerance (abipy.core.skw.ElectronInterpolator attribute) animate() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.electrons.ebands.ElectronBandsPlotter method) any2mb() (in module abipy.flowtk.qutils) append() (abipy.abio.inputs.MultiDataset method) append_plotter() (abipy.dfpt.phonons.PhononBandsPlotter method) apply() (abipy.electrons.scissors.Scissors method) apply_getters() (abipy.flowtk.nodes.Dependency method) apply_scissors() (abipy.electrons.ebands.ElectronBands method) arange() (abipy.abio.inputs.AbinitInput method) ArrayPlotter (class in abipy.tools.plotting) as_bool() (in module abipy.flowtk.utils) as_condition() (abipy.flowtk.utils.Condition class method) as_ddb() (abipy.dfpt.ddb.DdbFile class method) as_dict() (abipy.abio.decorators.LdaUDecorator method) (abipy.abio.decorators.LexxDecorator method) (abipy.abio.decorators.SmearingDecorator method) (abipy.abio.decorators.SpinDecorator method) (abipy.abio.decorators.XcDecorator method) (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.AnaddbInput method) (abipy.abio.inputs.Cut3DInput method) (abipy.abio.inputs.OpticInput method) (abipy.core.kpoints.KpointList method) (abipy.dfpt.ddb.Becs method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.QPState method) (abipy.flowtk.events.Correction method) (abipy.flowtk.events.DilatmxErrorHandler method) (abipy.flowtk.flows.Flow method) (abipy.flowtk.nodes.HistoryRecord method) (abipy.flowtk.nodes.NodeResults method) (abipy.flowtk.tasks.ParalHints method) (abipy.flowtk.tasks.TaskManager method) as_ebands() (abipy.electrons.ebands.ElectronBands class method) as_edos() (abipy.electrons.ebands.ElectronDos class method) as_flow() (abipy.flowtk.flows.Flow class method) as_kpoint() (abipy.core.kpoints.Kpoint class method) as_kpoints() (in module abipy.core.kpoints) as_manager() (abipy.flowtk.tasks.TaskManager class method) as_node() (abipy.flowtk.nodes.Node class method) as_phbands() (abipy.dfpt.phonons.PhononBands class method) as_phdos() (abipy.dfpt.phonons.PhononDos class method) as_slice() (in module abipy.tools.duck) as_status() (abipy.flowtk.nodes.Status class method) as_structure() (abipy.core.structure.Structure class method) asctime (abipy.flowtk.nodes.HistoryRecord attribute) ask_yes_no() (in module abipy.tools.iotools) asr (abipy.panels.ddb.PanelWithAnaddbParams attribute) asr_breaking() (abipy.dfpt.phonons.PhononBands method) assert_almost_equal() (abipy.core.testing.AbipyTest static method) assert_equal() (abipy.core.testing.AbipyTest static method) assert_input_equality() (abipy.core.testing.AbipyTest static method) assume_gap() (abipy.eph.rta.RtaFile method) (abipy.eph.rta.RtaRobot method) atoms_from_structure() (in module abipy.flowtk.abiphonopy) autodoc() (abipy.flowtk.launcher.PyFlowScheduler class method) (abipy.flowtk.tasks.TaskManager class method) autoparal_run() (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.OpticTask method) available_advanced_options (abipy.electrons.lobster.LobsterInput attribute) average_gruneisen() (abipy.dfpt.gruneisen.GrunsNcFile method) averaged (abipy.electrons.lobster.CoxpFile attribute)

B

BaderCharges (class in abipy.electrons.charges) band_block() (abipy.electrons.eskw.EskwFile method) bands_dict() (abipy.dfpt.phonons.PhononBandsPlotter property) bands_in() (abipy.wannier90.abiwan.AbiwanFile method) bands_statdiff() (abipy.electrons.ebands.ElectronBandsPlotter method) bandstructure_flow() (in module abipy.flowtk.flows) BandStructureWork (class in abipy.flowtk.works) bandwidths() (abipy.electrons.ebands.ElectronBands property) base_point() (abipy.core.kpoints.KpointStar property) BaseEphReader (class in abipy.eph.common) basename() (abipy.abio.variable.InputVariable property) (abipy.flowtk.nodes.FileNode method) (abipy.flowtk.utils.Directory property) (abipy.flowtk.utils.File property) BaseRobotPanel (class in abipy.panels.core) batch() (abipy.flowtk.flows.Flow method) bcc() (abipy.core.structure.Structure class method) bec_tasks (abipy.flowtk.abiphonopy.PhonopyWork attribute) becs (abipy.dfpt.anaddbnc.AnaddbNcFile attribute) Becs (class in abipy.dfpt.ddb) becs() (abipy.dfpt.anaddbnc.AnaddbNcFile method) BecWork (class in abipy.flowtk.works)

binpath() (abipy.iotools.visualizer.Visualizer method) BlochRegularGridInterpolator (class in abipy.tools.numtools) blocks() (abipy.dfpt.ddb.DdbFile method) BlueGeneJob (class in abipy.flowtk.qjobs) bma() (abipy.core.func1d.Function1D property) born_to_lotosplitting() (in module abipy.dfpt.converters) boxed_atom() (abipy.core.structure.Structure class method) boxed_molecule() (abipy.core.structure.Structure class method) boxplot() (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronBandsPlotter method) braket() (abipy.waves.pwwave.PWWaveFunction method) bse_with_mdf_inputs() (in module abipy.abio.factories) BseMdfWork (class in abipy.flowtk.works) build() (abipy.electrons.scissors.ScissorsBuilder method) (abipy.flowtk.flows.Flow method) (abipy.flowtk.works.Work method) build_and_pickle_dump() (abipy.flowtk.flows.Flow method) build_flow_main_parser() (in module abipy.flowtk) ButtonContext (class in abipy.panels.core) bxsf_write() (in module abipy.iotools.xsf) bz (abipy.core.kpoints.Ktables attribute)

C

calc_kptbounds() (abipy.core.structure.Structure method) calc_ksampling() (abipy.core.structure.Structure method) calc_ngkpt() (abipy.core.structure.Structure method) calc_shiftk() (abipy.core.structure.Structure method) calculate_gruns_finite_differences() (in module abipy.dfpt.gruneisen) callback() (abipy.flowtk.launcher.PyFlowScheduler method) can_change_physics (abipy.flowtk.events.DilatmxErrorHandler attribute) cancel() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.TaskManager method) cart_bounds() (abipy.core.kpoints.Kpath method) cart_coords() (abipy.core.kpoints.Kpoint method) cart_forces() (abipy.dfpt.ddb.DdbFile method) (abipy.electrons.gsr.GsrFile method) cart_stress_tensor() (abipy.dfpt.ddb.DdbFile method) (abipy.electrons.gsr.GsrFile method) cbk_qptdm_workflow() (abipy.flowtk.flows.G0W0WithQptdmFlow method) cempty() (abipy.core.gsphere.GSphere method) (abipy.core.mesh3d.Mesh3D method) change_labels() (abipy.abio.robots.Robot method) change_task_start() (in module abipy.flowtk.mocks) check_dependencies() (abipy.flowtk.flows.Flow method) check_pid_file() (abipy.flowtk.flows.Flow method) check_site_symmetries() (abipy.core.site_symmetries.SiteSymmetries method) (abipy.dfpt.ddb.Becs method) (abipy.dfpt.msqdos.MsqDos method) check_spectator() (in module abipy.flowtk.nodes) check_status() (abipy.flowtk.flows.Flow method) (abipy.flowtk.mocks.InfiniteFlow method) (abipy.flowtk.nodes.FileNode method) (abipy.flowtk.nodes.Node method) (abipy.flowtk.works.Work method) check_weights() (abipy.core.kpoints.KpointList method) chemical_symbols() (abipy.iotools.ETSF_Reader method) chmod() (abipy.flowtk.utils.File method) chneut (abipy.panels.ddb.PanelWithAnaddbParams attribute) chroot() (abipy.flowtk.flows.Flow method) (abipy.flowtk.works.Work method) chunks() (abipy.flowtk.works.Work method) cif_file() (in module abipy.data) class_for_ext() (abipy.abio.robots.Robot class method) class_handles_filename() (abipy.abio.robots.Robot class method) (abipy.dfpt.ddb.DdbRobot class method) clean() (abipy.flowtk.utils.Directory method) cleanup() (abipy.flowtk.launcher.PyFlowScheduler method) close() (abipy.abio.abivars.AbinitInputFile method) (abipy.abio.outputs.OutNcFile method) (abipy.abio.robots.Robot method) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.qha.QHA3P method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.bse.MdfFile method) (abipy.electrons.eskw.EskwFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.fold2bloch.Fold2BlochNcfile method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.psps.PspsFile method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2fFile method) (abipy.eph.rta.RtaFile method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.transportfile.TransportFile method) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.wannier90.wout.WoutFile method) (abipy.waves.wfkfile.WfkFile method) cmdarg() (abipy.iotools.visualizer.Visualizer property) cod_search() (in module abipy.core.structure) CodStructures (class in abipy.core.restapi) color_der (abipy.electrons.psps.PspsFile attribute) color_hex() (abipy.flowtk.nodes.Node method) color_opts() (abipy.flowtk.nodes.Status property) color_rgb (abipy.flowtk.nodes.FileNode attribute) (abipy.flowtk.nodes.Node attribute) (abipy.flowtk.tasks.AnaddbTask attribute) (abipy.flowtk.tasks.DdkTask attribute) (abipy.flowtk.tasks.EffMassTask attribute) (abipy.flowtk.tasks.ElasticTask attribute) (abipy.flowtk.tasks.EphTask attribute) (abipy.flowtk.tasks.KerangeTask attribute) (abipy.flowtk.tasks.NscfTask attribute) (abipy.flowtk.tasks.OpticTask attribute) (abipy.flowtk.tasks.PhononTask attribute) (abipy.flowtk.tasks.RelaxTask attribute) (abipy.flowtk.tasks.ScfTask attribute) (abipy.flowtk.tasks.SigmaTask attribute)

color_spin (abipy.electrons.gw.SigresFile attribute) (abipy.eph.sigeph.SigEPhFile attribute) colored() (abipy.flowtk.nodes.Status property) colormap (abipy.dfpt.qha.AbstractQmeshAnalyzer attribute) colormap_widget() (in module abipy.display.utils) colors_dropdow() (in module abipy.display.utils) combiboxplot() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.electrons.ebands.ElectronBandsPlotter method) combiplot() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDosPlotter method) combiplotly() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) comment() (abipy.abio.inputs.AbinitInput property) common_eph_params() (abipy.eph.common.BaseEphReader method) compare() (abipy.electrons.psps.PspsFile method) compare_abivars() (abipy.flowtk.flows.Flow method) compare_d2de_scf_cycles() (abipy.abio.outputs.AbinitOutputFile method) compare_ebands() (abipy.flowtk.flows.Flow method) compare_gauss_edos() (abipy.electrons.ebands.ElectronBands method) compare_gs_scf_cycles() (abipy.abio.outputs.AbinitOutputFile method) compare_hist() (abipy.flowtk.flows.Flow method) compare_structures() (abipy.flowtk.flows.Flow method) compare_version() (abipy.flowtk.tasks.AbinitBuild method) CompareDdbWithMP (class in abipy.panels.ddb) compute_star() (abipy.core.kpoints.Kpoint method) computed_components_intersection() (abipy.electrons.optic.OpticRobot method) computed_dynmat() (abipy.dfpt.ddb.DdbFile method) Condition (class in abipy.flowtk.utils) ConducWork (class in abipy.flowtk.works) conjugate() (abipy.core.func1d.Function1D method) connect_signals() (abipy.flowtk.flows.Flow method) connecting_vars() (abipy.flowtk.nodes.Dependency method) (abipy.flowtk.nodes.Product method) convert() (abipy.core.structure.Structure method) (abipy.panels.structure.StructurePanel method) convert_to_ieee() (abipy.dfpt.elastic.ElasticData method) convert_ucart() (abipy.dfpt.msqdos.MsqDos method) coords_dataframe() (abipy.core.restapi.DatabaseStructures property) cop_type (abipy.electrons.lobster.CoxpFile attribute) (abipy.electrons.lobster.ICoxpFile attribute) copy() (abipy.core.gsphere.GSphere method) (abipy.core.kpoints.Kpoint method) (abipy.electrons.gw.QPState method) (abipy.flowtk.tasks.ParalHints method) copy_abiext() (abipy.flowtk.utils.Directory method) copy_r() (abipy.flowtk.utils.Directory method) Correction (class in abipy.flowtk.events) corrections() (abipy.flowtk.nodes.Node property) count() (abipy.core.gsphere.GSphere method) (abipy.core.kpoints.KpointList method) CoxpFile (class in abipy.electrons.lobster) cpdata2dst (abipy.flowtk.abiphonopy.PhonopyWork attribute) crandom() (abipy.core.mesh3d.Mesh3D method) create_ascii_vib() (abipy.dfpt.phonons.PhononBands method) create_phononwebsite_json() (abipy.dfpt.phonons.PhononBands method) create_tasks() (abipy.flowtk.works.QptdmWork method) create_xsf() (abipy.eph.wr.WrNcFile method) create_xyz_vib() (abipy.dfpt.phonons.PhononBands method) created (abipy.flowtk.nodes.HistoryRecord attribute) creation_date (abipy.flowtk.flows.Flow attribute) critical() (abipy.flowtk.nodes.NodeHistory method) CRITICAL_EVENTS (abipy.flowtk.tasks.NscfTask attribute) (abipy.flowtk.tasks.RelaxTask attribute) (abipy.flowtk.tasks.ScfTask attribute) (abipy.flowtk.tasks.SigmaTask attribute) Cut3DInput (class in abipy.abio.inputs) cycle_class() (abipy.flowtk.tasks.AbinitTask method) czeros() (abipy.core.gsphere.GSphere method) (abipy.core.mesh3d.Mesh3D method)

D

data_from_cplx_mode() (in module abipy.tools.numtools) (in module abipy.tools.plotting) DatabaseStructures (class in abipy.core.restapi) dataframe() (abipy.core.restapi.CodStructures method) (abipy.core.restapi.MpStructures method) (abipy.core.restapi.PhaseDiagramResults method) (abipy.electrons.lobster.ICoxpFile method) dataframe_from_ebands() (in module abipy.electrons.ebands) dataframe_from_pseudos() (in module abipy.electrons.psps) dataframes_from_structures() (in module abipy.core.structure) dataset() (abipy.abio.variable.InputVariable property) db_insert() (abipy.flowtk.flows.Flow method) dbname (abipy.core.restapi.CodStructures attribute) (abipy.core.restapi.MpStructures attribute) dchide() (abipy.dfpt.anaddbnc.AnaddbNcFile method) dchidt() (abipy.dfpt.anaddbnc.AnaddbNcFile method) ddb_filepath() (abipy.flowtk.tasks.AnaddbTask property) ddb_ngqpt() (abipy.eph.common.BaseEphReader method) DdbError DdbFile (class in abipy.dfpt.ddb) DdbFile.AnaddbError DdbFilePanel (class in abipy.panels.ddb) DdbPanelWithFileInput (class in abipy.panels.ddb) DdbRobot (class in abipy.dfpt.ddb) DdbRobotPanel (class in abipy.panels.ddb) ddk_filepath() (abipy.flowtk.tasks.AnaddbTask property) ddk_filepaths() (abipy.flowtk.tasks.OpticTask property) DdkTask (class in abipy.flowtk.tasks) debug() (abipy.flowtk.flows.Flow method) (abipy.flowtk.nodes.NodeHistory method) debye_temp() (abipy.dfpt.gruneisen.GrunsNcFile property) (abipy.dfpt.phonons.PhononDos property) declare_var() (abipy.flowtk.launcher.ScriptEditor method) declare_vars() (abipy.flowtk.launcher.ScriptEditor method) decode_with_MSON() (abipy.core.testing.AbipyTest method) decorate_ax() (abipy.dfpt.phonons.PhononBands method) (abipy.electrons.ebands.ElectronBands method) decorate_plotly() (abipy.dfpt.phonons.PhononBands method) (abipy.electrons.ebands.ElectronBands method) decorators() (abipy.abio.inputs.AbinitInput property) deepcopy() (abipy.abio.inputs.AbstractInput method) (abipy.abio.inputs.MultiDataset method) (abipy.electrons.ebands.ElectronBands method) (abipy.flowtk.tasks.TaskManager method) DEFAULT_EDITOR (abipy.tools.iotools.Editor attribute) degeneracies() (abipy.electrons.ebands.ElectronBands method) den_to_3d_formatted() (abipy.abio.inputs.Cut3DInput class method) den_to_3d_indexed() (abipy.abio.inputs.Cut3DInput class method) den_to_cube() (abipy.abio.inputs.Cut3DInput class method) den_to_molekel() (abipy.abio.inputs.Cut3DInput class method)

den_to_tecplot() (abipy.abio.inputs.Cut3DInput class method) den_to_xsf() (abipy.abio.inputs.Cut3DInput class method) Density (class in abipy.core.fields) density() (abipy.electrons.denpot.DensityNcFile method) DensityNcFile (class in abipy.electrons.denpot) Dependency (class in abipy.flowtk.nodes) depends_on() (abipy.flowtk.nodes.Node method) depends_on_btn_click() (in module abipy.panels.core) deps() (abipy.flowtk.nodes.Node property) deps_status() (abipy.flowtk.nodes.Node property) der2() (abipy.electrons.psps.VnlProjector property) derivatives() (abipy.electrons.ebands.ElectronBands method) det() (abipy.core.symmetries.LatticeRotation method) dfc() (in module abipy.panels.core) dfpt() (abipy.abio.inputs.AnaddbInput class method) dfpt_from_gsinput() (in module abipy.abio.factories) DielectricFunction (class in abipy.electrons.bse) (class in abipy.electrons.scr) DielectricTensor (class in abipy.tools.tensors) DielectricTensorGenerator (class in abipy.dfpt.ddb) diff_datasets() (abipy.abio.outputs.AbinitOutputFile method) difflib() (abipy.tools.devtools.HtmlDiff method) DilatmxError (class in abipy.flowtk.events) DilatmxErrorHandler (class in abipy.flowtk.events) dipdip (abipy.panels.ddb.PanelWithAnaddbParams attribute) dir2abifiles() (in module abipy.abilab) direct_gaps() (abipy.electrons.ebands.ElectronBands property) Directory (class in abipy.flowtk.utils) dirname() (abipy.flowtk.utils.File property) Dirviz (class in abipy.flowtk.utils) disable_notebook() (in module abipy.core.globals) disconnect_signals() (abipy.flowtk.flows.Flow method) dispersionless_states() (abipy.electrons.ebands.ElectronBands method) displ_shape() (abipy.dfpt.phonons.PhononBands property) displace() (abipy.core.structure.Structure method) display_structure() (in module abipy.abilab) display_top() (in module abipy.tools.devtools) dist_gridpoints_in_spheres() (abipy.core.mesh3d.Mesh3D method) docvar() (in module abipy.abio.abivars_db) dos_idos() (abipy.electrons.ebands.ElectronDos method) dos_method (abipy.panels.ddb.PanelWithAnaddbParams attribute) doses() (abipy.dfpt.gruneisen.GrunsNcFile method) dot() (abipy.core.structure.Structure method) Dotdict (class in abipy.core.restapi) dotget() (abipy.core.restapi.Dotdict method) ds() (abipy.core.kpoints.Kpath method) dte_from_gsinput() (in module abipy.abio.factories) DteWork (class in abipy.flowtk.works) dx() (abipy.core.func1d.Function1D method) dyn_mat_eigenvect() (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phtk.NonAnalyticalPh method)

E

e0max() (abipy.electrons.scissors.ScissorsBuilder property) e0min() (abipy.electrons.scissors.ScissorsBuilder property) eb_plotax_kwargs() (abipy.electrons.fatbands.FatBandsFile method) eb_plotly_kwargs() (abipy.electrons.fatbands.FatBandsFile method) ebands() (abipy.core.mixins.Has_ElectronBands property) (abipy.electrons.effmass_analyzer.EffMassAnalyzer property) (abipy.electrons.eskw.EskwFile property) (abipy.electrons.fatbands.FatBandsFile property) (abipy.electrons.fold2bloch.Fold2BlochNcfile property) (abipy.electrons.gsr.GsrFile property) (abipy.electrons.gw.SigresFile property) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2fFile method) (abipy.eph.rta.RtaFile method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.transportfile.TransportFile method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.waves.wfkfile.WfkFile property) ebands_input() (in module abipy.abio.factories) ebands_kmesh (abipy.panels.core.PanelWithElectronBands attribute) ebands_kmesh_fileinput (abipy.panels.core.PanelWithElectronBands attribute) ebands_kpath (abipy.panels.core.PanelWithElectronBands attribute) ebands_kpath_fileinput (abipy.panels.core.PanelWithElectronBands attribute) ebands_list() (abipy.electrons.ebands.ElectronBandsPlotter property) ecut() (abipy.electrons.gsr.GsrFile method) ecuts() (abipy.electrons.psps.VnlProjector property) edit_file() (abipy.flowtk.utils.Editor method) (abipy.tools.iotools.Editor method) edit_files() (abipy.flowtk.utils.Editor method) (abipy.tools.iotools.Editor method) Editor (class in abipy.flowtk.utils) (class in abipy.tools.iotools) EditorError edos() (abipy.eph.a2f.A2fFile method) (abipy.eph.sigeph.SigEPhFile method) edos_list() (abipy.electrons.ebands.ElectronDosPlotter property) edos_method (abipy.panels.core.PanelWithElectronBands attribute) edos_step_ev (abipy.panels.core.PanelWithElectronBands attribute) edos_width_ev (abipy.panels.core.PanelWithElectronBands attribute) edoses_list() (abipy.electrons.ebands.ElectronBandsPlotter property) effective_masses() (abipy.electrons.ebands.ElectronBands method) EffMassAnalyzer (class in abipy.electrons.effmass_analyzer) EffMassAutoDFPTWork (class in abipy.flowtk.effmass_works) EffMassDFPTWork (class in abipy.flowtk.effmass_works) EffMassLineWork (class in abipy.flowtk.effmass_works) EffMassTask (class in abipy.flowtk.tasks) eigens() (abipy.electrons.ebands.ElectronBands property) einterp() (abipy.electrons.eskw.EskwFile method) elastic_data() (abipy.dfpt.anaddbnc.AnaddbNcFile method) ElasticData (class in abipy.dfpt.elastic) ElasticTask (class in abipy.flowtk.tasks) ElasticWork (class in abipy.flowtk.dfpt_works) ElectronBands (class in abipy.electrons.ebands) ElectronBandsPlotter (class in abipy.electrons.ebands) ElectronDos (class in abipy.electrons.ebands) ElectronDosPlotter (class in abipy.electrons.ebands) ElectronInterpolator (class in abipy.core.skw) emacro() (abipy.dfpt.anaddbnc.AnaddbNcFile property) emacro_rlx() (abipy.dfpt.anaddbnc.AnaddbNcFile property) empty() (abipy.core.gsphere.GSphere method) (abipy.core.mesh3d.Mesh3D method) empty_with_ibz() (abipy.electrons.ebands.ElectronBands class method) enable_notebook() (in module abipy.core.globals) enemax() (abipy.electrons.ebands.ElectronBands method) enemin() (abipy.electrons.ebands.ElectronBands method) energies (abipy.electrons.lobster.CoxpFile attribute) (abipy.electrons.lobster.LobsterDoscarFile attribute) energies() (abipy.dfpt.frozen_phonons.FrozenPhonon property) energy() (abipy.electrons.gsr.GsrFile method) energy_per_atom() (abipy.electrons.gsr.GsrFile method) energy_terms() (abipy.electrons.gsr.GsrFile method) enforce_znucl_and_typat() (abipy.abio.inputs.AbinitInput method) enter_context() (abipy.tools.iotools.ExitStackWithFiles method) ENTRIES (abipy.flowtk.tasks.TaskManager attribute) EosWork (class in abipy.flowtk.gs_works) eph_ngqpt_fine() (abipy.eph.common.BaseEphReader method) EphPlotter (class in abipy.eph.eph_plotter)

EphPotFlow (class in abipy.flowtk.eph_flows) EphSelfEnergy (class in abipy.eph.sigeph) EphTask (class in abipy.flowtk.tasks) eps0() (abipy.dfpt.anaddbnc.AnaddbNcFile method) epsinf (abipy.dfpt.anaddbnc.AnaddbNcFile attribute) epsinf() (abipy.dfpt.anaddbnc.AnaddbNcFile method) Error (abipy.abio.decorators.AbinitInputDecorator attribute) (abipy.abio.inputs.AbinitInput attribute) (abipy.abio.inputs.AnaddbInput attribute) (abipy.abio.inputs.MultiDataset attribute) (abipy.abio.inputs.OpticInput attribute) (abipy.core.kpoints.KpointList attribute) (abipy.core.restapi.MyMPRester attribute) (abipy.dfpt.ddb.DdbFile attribute) (abipy.electrons.ebands.ElectronBands attribute) (abipy.electrons.scissors.Scissors attribute) (abipy.flowtk.events.EventsParser attribute) (abipy.flowtk.flows.Flow attribute) (abipy.flowtk.launcher.PyFlowScheduler attribute) (abipy.flowtk.launcher.PyLauncher attribute) (abipy.flowtk.nodes.Node attribute) (abipy.flowtk.tasks.ParalHints attribute) (abipy.flowtk.tasks.ParalHintsParser attribute) (abipy.iotools.visualizer.Visualizer attribute) (abipy.tools.iotools.Editor attribute) errored_tasks() (abipy.flowtk.flows.Flow property) EskwFile (class in abipy.electrons.eskw) estimated_start_time() (abipy.flowtk.qjobs.PbsProJob method) (abipy.flowtk.qjobs.QueueJob method) (abipy.flowtk.qjobs.SlurmJob method) etotals() (abipy.dynamics.hist.HistFile method) ETSF_Reader (class in abipy.iotools) eval_abinit_operators() (abipy.abio.abivars.AbinitInputParser static method) eval_line() (abipy.tools.numtools.BlochRegularGridInterpolator method) eval_points() (abipy.tools.numtools.BlochRegularGridInterpolator method) eval_sk() (abipy.core.skw.ElectronInterpolator method) (abipy.core.skw.SkwInterpolator method) (abipy.wannier90.abiwan.HWanR method) evaluate_rpn() (in module abipy.flowtk.utils) event_class (abipy.flowtk.events.DilatmxErrorHandler attribute) event_handlers() (abipy.flowtk.nodes.Node property) events() (abipy.abio.outputs.AbinitTextFile property) EventsParser (class in abipy.flowtk.events) exc_mdf() (abipy.electrons.bse.MdfFile method) exceptions() (abipy.abio.robots.Robot property) (abipy.flowtk.nodes.NodeResults property) exclude_nodes() (abipy.flowtk.tasks.TaskManager method) executable() (abipy.flowtk.tasks.AbinitTask property) (abipy.flowtk.tasks.AnaddbTask property) (abipy.flowtk.tasks.OpticTask property) exists() (abipy.flowtk.utils.Directory property) (abipy.flowtk.utils.File property) ExitStackWithFiles (class in abipy.tools.iotools) export() (abipy.core.structure.Structure method) export_envar() (abipy.flowtk.launcher.ScriptEditor method) export_envars() (abipy.flowtk.launcher.ScriptEditor method) export_structure() (abipy.core.mixins.Has_Structure method) export_to_cube() (abipy.core.fields.Density method) export_ur2() (abipy.waves.pwwave.PWWaveFunction method) (abipy.waves.wfkfile.WfkFile method) expose() (abipy.core.mixins.NotebookWriter method) expose_ebands() (abipy.core.mixins.Has_ElectronBands method) expose_phbands() (abipy.core.mixins.Has_PhononBands method) EXT (abipy.abio.outputs.AboRobot attribute) (abipy.dfpt.anaddbnc.AnaddbNcRobot attribute) (abipy.dfpt.ddb.DdbRobot attribute) (abipy.dynamics.hist.HistRobot attribute) (abipy.electrons.gw.SigresRobot attribute) (abipy.electrons.optic.OpticRobot attribute) (abipy.eph.a2f.A2fRobot attribute) (abipy.eph.rta.RtaRobot attribute) (abipy.eph.sigeph.SigEPhRobot attribute) (abipy.wannier90.abiwan.AbiwanRobot attribute) extcls_supporting_panel() (in module abipy.abilab) extend() (abipy.abio.inputs.MultiDataset method) (abipy.tools.plotting.Marker method) extensions (abipy.panels.core.MyMarkdown attribute) extract_point_group() (in module abipy.core.skw)

F

FatBandsFile (class in abipy.electrons.fatbands) FatBandsFilePanel (class in abipy.panels.fatbands) fcc() (abipy.core.structure.Structure class method) fermie (abipy.electrons.ebands.ElectronBands attribute) (abipy.electrons.lobster.CoxpFile attribute) fetch_tasks_to_run() (abipy.flowtk.launcher.PyLauncher method) fft() (abipy.core.func1d.Function1D method) fft_g2r() (abipy.core.mesh3d.Mesh3D method) fft_r2g() (abipy.core.mesh3d.Mesh3D method) FFTBenchmark (class in abipy.tools.fftprof) field_name (abipy.electrons.denpot.DensityNcFile attribute) (abipy.electrons.denpot.PotNcFile attribute) (abipy.electrons.denpot.VhartreeNcFile attribute) (abipy.electrons.denpot.VhxcNcFile attribute) (abipy.electrons.denpot.VxcNcFile attribute) File (class in abipy.flowtk.utils) filechildren() (abipy.flowtk.nodes.FileNode property) filename (abipy.flowtk.nodes.HistoryRecord attribute) FileNode (class in abipy.flowtk.nodes) filepath() (abipy.flowtk.nodes.Product property) FilepathFixer (class in abipy.flowtk.utils) filesfile_string() (abipy.flowtk.tasks.AbinitTask property) (abipy.flowtk.tasks.AnaddbTask property) (abipy.flowtk.tasks.OpticTask property) filter_by_runlevel() (abipy.abio.inputs.MultiDataset method) filter_by_spgnum() (abipy.core.restapi.DatabaseStructures method) filter_by_tags() (abipy.abio.inputs.MultiDataset method) final_energy() (abipy.dynamics.hist.HistFile method) final_pressure() (abipy.dynamics.hist.HistFile method) final_structure() (abipy.abio.outputs.AbinitOutputFile method) (abipy.dynamics.hist.HistFile property) final_structures() (abipy.abio.outputs.AbinitOutputFile method) finalize() (abipy.flowtk.effmass_works.FrohlichZPRFlow method) (abipy.flowtk.flows.Flow method) (abipy.flowtk.qha.QhaFlow method) finalized() (abipy.flowtk.nodes.Node property) find() (abipy.core.kpoints.KpointList method) find_1den_files() (abipy.flowtk.utils.Directory method) find_1wf_files() (abipy.flowtk.utils.Directory method) find_closest() (abipy.core.kpoints.KpointList method) find_convindex() (in module abipy.tools.numtools) find_deadlocks() (abipy.flowtk.flows.Flow method) find_degs_sk() (in module abipy.tools.numtools) find_kpoint_fileindex() (abipy.electrons.scr.ScrReader method) find_last_timden_file() (abipy.flowtk.utils.Directory method) find_little_group() (abipy.core.symmetries.AbinitSpaceGroup method) find_mesh_index() (abipy.core.func1d.Function1D method) find_mu() (abipy.electrons.ebands.ElectronDos method) find_optconf() (abipy.flowtk.tasks.AbinitTask method) find_parent_with_ext() (abipy.flowtk.nodes.Node method) find_points_along_path() (abipy.core.kpoints.Kpath method) (in module abipy.core.kpoints) find_qpkinds() (abipy.eph.sigeph.SigEPhFile method) findname_in_hsym_stars() (abipy.core.structure.Structure method) finite_diff() (abipy.core.func1d.Function1D method) (abipy.core.kpoints.Kpath method) (in module abipy.tools.derivatives) fit_energies() (abipy.dfpt.qha.AbstractQHA method) fit_to_frequency() (abipy.dfpt.frozen_phonons.FrozenPhonon method) fit_to_structure() (abipy.dfpt.elastic.ElasticData method) fitted_frequencies() (abipy.dfpt.qha.QHA3P method) fix_abicritical() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.OpticTask method) fix_ofiles() (abipy.flowtk.tasks.RelaxTask method) fix_paths() (abipy.flowtk.utils.FilepathFixer method) fix_queue_critical() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.OpticTask method) Flow (class in abipy.flowtk.flows) flow() (abipy.flowtk.launcher.PyFlowScheduler property) (abipy.flowtk.works.Work property) flow_main() (in module abipy.flowtk) FlowPanel (class in abipy.panels.flows) fm_symmops() (abipy.core.symmetries.AbinitSpaceGroup property) Fold2BlochNcfile (class in abipy.electrons.fold2bloch) fontsize (abipy.dfpt.qha.AbstractQmeshAnalyzer attribute) force_stats() (abipy.electrons.gsr.GsrFile method) format_list() (abipy.abio.variable.InputVariable method) format_list2d() (abipy.abio.variable.InputVariable method) format_scalar() (abipy.abio.variable.InputVariable method) frac_bounds() (abipy.core.kpoints.Kpath method) frac_coords() (abipy.core.kpoints.Kpoint property) (abipy.core.kpoints.KpointList property) FrohlichZPRFlow (class in abipy.flowtk.effmass_works) from_abinit_file() (abipy.wannier90.win.Wannier90Input class method) from_abistring() (abipy.core.structure.Structure class method) from_abivars() (abipy.core.structure.Structure class method) from_ase_atoms() (abipy.core.structure.Structure class method) from_binary_string() (abipy.core.mixins.AbinitNcFile class method) (abipy.electrons.ebands.ElectronBands class method) from_chgcar_poscar() (abipy.core.fields.Density class method) from_cod_id() (abipy.core.structure.Structure class method) from_constant() (abipy.core.func1d.Function1D class method) from_cube() (abipy.core.fields.Density class method) from_cut3d_outfile() (abipy.electrons.charges.HirshfeldCharges class method) from_ddb() (abipy.dfpt.vsound.SoundVelocity class method) (abipy.eph.eph_plotter.EphPlotter class method) from_ddb_list() (abipy.dfpt.gruneisen.GrunsNcFile class method) from_den_ddb_dvdb() (abipy.flowtk.works.GKKPWork class method) from_dict() (abipy.abio.decorators.LdaUDecorator class method) (abipy.abio.decorators.LexxDecorator class method) (abipy.abio.decorators.SmearingDecorator class method) (abipy.abio.decorators.SpinDecorator class method) (abipy.abio.decorators.XcDecorator class method) (abipy.abio.inputs.AbinitInput class method) (abipy.abio.inputs.AnaddbInput class method) (abipy.abio.inputs.Cut3DInput class method) (abipy.abio.inputs.OpticInput class method) (abipy.core.kpoints.KpointList class method) (abipy.electrons.ebands.ElectronBands class method) (abipy.flowtk.events.Correction class method) (abipy.flowtk.events.DilatmxErrorHandler class method) (abipy.flowtk.flows.Flow class method) (abipy.flowtk.nodes.HistoryRecord class method) (abipy.flowtk.nodes.NodeResults class method) (abipy.flowtk.tasks.ParalHints class method) (abipy.flowtk.tasks.TaskManager class method)

from_dir() (abipy.abio.robots.Robot class method) (abipy.electrons.lobster.LobsterAnalyzer class method) (abipy.electrons.lobster.LobsterInput class method) from_dir_glob() (abipy.abio.robots.Robot class method) from_dirs() (abipy.abio.robots.Robot class method) from_file() (abipy.core.func1d.Function1D class method) (abipy.core.structure.Structure class method) (abipy.dfpt.anaddbnc.AnaddbNcFile class method) (abipy.dfpt.ddb.DdbFile class method) (abipy.dfpt.elastic.ElasticData class method) (abipy.dfpt.gruneisen.GrunsNcFile class method) (abipy.dfpt.ifc.InteratomicForceConstants class method) (abipy.dfpt.phonons.PhononBands class method) (abipy.dfpt.phtk.NonAnalyticalPh class method) (abipy.dfpt.raman.Raman class method) (abipy.dynamics.hist.HistFile class method) (abipy.electrons.bse.MdfFile class method) (abipy.electrons.ebands.ElectronBands class method) (abipy.electrons.effmass_analyzer.EffMassAnalyzer class method) (abipy.electrons.eskw.EskwFile class method) (abipy.electrons.fatbands.FatBandsFile class method) (abipy.electrons.gsr.GsrFile class method) (abipy.electrons.gw.SigresFile class method) (abipy.electrons.lobster.CoxpFile class method) (abipy.electrons.lobster.ICoxpFile class method) (abipy.electrons.lobster.LobsterDoscarFile class method) (abipy.electrons.optic.OpticNcFile class method) (abipy.electrons.psps.PspsFile class method) (abipy.electrons.scissors.ScissorsBuilder class method) (abipy.electrons.scr.ScrFile class method) (abipy.eph.a2f.A2fFile class method) (abipy.eph.rta.RtaFile class method) (abipy.eph.sigeph.SigEPhFile class method) (abipy.eph.transportfile.TransportFile class method) (abipy.flowtk.flows.Flow class method) (abipy.flowtk.launcher.PyFlowScheduler class method) (abipy.flowtk.nodes.Product class method) (abipy.flowtk.tasks.TaskManager class method) (abipy.iotools.visualizer.Visualizer class method) (abipy.tools.fftprof.FFTBenchmark class method) (abipy.tools.tensors.NLOpticalSusceptibilityTensor class method) (abipy.wannier90.abiwan.AbiwanFile class method) from_filepath() (abipy.flowtk.works.ConducWork class method) from_files() (abipy.abio.robots.Robot class method) (abipy.dfpt.ddb.DielectricTensorGenerator class method) (abipy.dfpt.qha.QHA class method) (abipy.dfpt.qha.QHA3P class method) (abipy.dfpt.qha.QHA3PF class method) (abipy.electrons.charges.BaderCharges class method) (abipy.tools.plotting.GenericDataFilesPlotter class method) from_flow() (abipy.abio.robots.Robot class method) from_func() (abipy.core.func1d.Function1D class method) from_gs_input() (abipy.flowtk.abiphonopy.PhonopyGruneisenWork class method) (abipy.flowtk.abiphonopy.PhonopyWork class method) (abipy.flowtk.gruneisen.GruneisenWork class method) from_input() (abipy.flowtk.tasks.AbinitTask class method) from_inputs() (abipy.abio.inputs.MultiDataset class method) (abipy.flowtk.flows.Flow class method) from_kppa() (abipy.core.kpoints.IrredZone class method) from_mpi_omp_lists() (abipy.flowtk.tasks.ParalHints class method) from_mpid() (abipy.core.structure.Structure class method) (abipy.dfpt.ddb.DdbFile class method) (abipy.electrons.ebands.ElectronBands class method) from_mpid_list() (abipy.dfpt.ddb.DdbRobot class method) from_name() (abipy.iotools.visualizer.Visualizer class method) from_name_and_structure() (abipy.core.kpoints.Kpoint class method) from_names() (abipy.core.kpoints.Kpath class method) from_ncreader() (abipy.core.symmetries.AbinitSpaceGroup class method) (abipy.dfpt.elastic.ElasticData class method) from_ngkpt() (abipy.core.kpoints.IrredZone class method) from_node() (abipy.flowtk.nodes.NodeResults class method) from_nscf_task() (abipy.flowtk.gw.ScreeningWork class method) from_objects() (abipy.dfpt.ddb.DielectricTensorGenerator class method) from_phbands() (abipy.dfpt.frozen_phonons.FrozenPhonon class method) from_phbst() (abipy.dfpt.vsound.SoundVelocity class method) from_phononwfkq_work() (abipy.flowtk.works.GKKPWork class method) from_phwork() (abipy.flowtk.works.ConducWork class method) from_pmg_bs() (abipy.dfpt.phonons.PhononBands class method) from_pymatgen() (abipy.electrons.ebands.ElectronBands class method) from_qtype_and_id() (abipy.flowtk.qjobs.QueueJob static method) from_scf_input() (abipy.flowtk.dfpt_works.ElasticWork class method) (abipy.flowtk.effmass_works.EffMassAutoDFPTWork class method) (abipy.flowtk.effmass_works.EffMassDFPTWork class method) (abipy.flowtk.effmass_works.EffMassLineWork class method) (abipy.flowtk.effmass_works.FrohlichZPRFlow class method) (abipy.flowtk.eph_flows.EphPotFlow class method) (abipy.flowtk.eph_flows.GkqPathFlow class method) (abipy.flowtk.gs_works.EosWork class method) (abipy.flowtk.qha.QhaFlow class method) (abipy.flowtk.qha.RelaxAndPhononWork class method) (abipy.flowtk.works.PhononWork class method) from_scf_inputs() (abipy.flowtk.lumi_works.LumiWork class method) from_scf_task() (abipy.flowtk.dfpt_works.NscfDdksWork class method) (abipy.flowtk.works.BecWork class method) (abipy.flowtk.works.DteWork class method) (abipy.flowtk.works.PhononWfkqWork class method) (abipy.flowtk.works.PhononWork class method) from_string() (abipy.abio.abivars.AbinitInputFile class method) (abipy.dfpt.ddb.DdbFile class method) (abipy.flowtk.launcher.PyFlowScheduler class method) (abipy.flowtk.nodes.Status class method) (abipy.flowtk.qjobs.JobStatus class method) (abipy.flowtk.tasks.TaskManager class method) from_structure() (abipy.core.symmetries.AbinitSpaceGroup class method) from_user_config() (abipy.flowtk.launcher.PyFlowScheduler class method) (abipy.flowtk.tasks.TaskManager class method) from_vertices_and_names() (abipy.core.kpoints.Kpath class method) from_wfk_filepath() (abipy.flowtk.gw.ScreeningWork class method) from_wfkpath() (abipy.electrons.fold2bloch.Fold2BlochNcfile class method) fromfftmesh() (abipy.core.gsphere.GSphere method) frozen_2phonon() (abipy.core.structure.Structure method) frozen_phonon() (abipy.core.structure.Structure method) FrozenPhonon (class in abipy.dfpt.frozen_phonons) func_name (abipy.flowtk.nodes.HistoryRecord attribute) Function1D (class in abipy.core.func1d) functions_pair() (abipy.electrons.lobster.CoxpFile method) functions_pair_lorbitals() (abipy.electrons.lobster.CoxpFile method) functions_pair_morbitals() (abipy.electrons.lobster.CoxpFile method) fundamental_gaps() (abipy.electrons.ebands.ElectronBands property)

G

g0w0_convergence_inputs() (in module abipy.abio.factories) g0w0_flow() (in module abipy.flowtk.flows) g0w0_with_ppmodel_inputs() (in module abipy.abio.factories) G0W0WithQptdmFlow (class in abipy.flowtk.flows) G0W0Work (class in abipy.flowtk.works) gamma() (abipy.core.kpoints.Kpoint class method) gamma_ev (abipy.panels.ddb.PanelWithAnaddbParams attribute) GarbageCollector (class in abipy.flowtk.nodes) gaussian() (in module abipy.tools.numtools) gaussians_dos() (in module abipy.electrons.fatbands) gc() (abipy.flowtk.nodes.Node property) gen_id() (in module abipy.panels.core) generate() (abipy.abio.inputs.AbstractInput method) generate_born_deriv() (in module abipy.dfpt.converters) GenericDataFilePlotter (class in abipy.tools.plotting) GenericDataFilesPlotter (class in abipy.tools.plotting) get_2nd_ord_block_string() (in module abipy.dfpt.ddb) get_2nd_ord_dict() (abipy.dfpt.ddb.DdbFile method) get_a2f_qsamp() (abipy.eph.a2f.A2fFile method) get_a2ftr_qsamp() (abipy.eph.a2f.A2fFile method) get_abifile_from_file_input() (abipy.panels.core.AbipyParameterized static method) get_abinb_workdir() (in module abipy.core.globals) get_abinit_template_cls_kwds() (abipy.panels.core.AbipyParameterized method) (in module abipy.panels.core) get_abinit_variables() (in module abipy.abio.abivars_db) get_abistructure_from_abiref() (abipy.core.testing.AbipyTest static method) get_acoustic_debye_temp() (abipy.dfpt.phonons.PhononDos method) get_alert_data_transfer() (abipy.panels.core.AbipyParameterized static method) get_all_d2de_scf_cycles() (abipy.abio.outputs.AbinitOutputFile method) get_all_gs_scf_cycles() (abipy.abio.outputs.AbinitOutputFile method) get_all_kindices() (abipy.core.kpoints.KpointList method) get_all_status() (abipy.flowtk.works.Work method) get_allvars() (abipy.abio.outputs.OutNcFile method) get_anaddb_variables() (in module abipy.abio.abivars_db) get_available() (abipy.iotools.visualizer.Visualizer class method) get_ax3d_fig_plt() (in module abipy.tools.plotting) get_ax_fig_plt() (in module abipy.tools.plotting) get_baserobot_code_cells() (abipy.abio.robots.Robot method) get_block_for_qpoint() (abipy.dfpt.ddb.DdbFile method) get_BORN_lines() (in module abipy.dfpt.converters) get_cart_coords() (abipy.core.kpoints.KpointList method) get_chemview() (abipy.core.structure.Structure method) get_chi2_latex_label() (abipy.electrons.optic.OpticNcFile method) get_children() (abipy.flowtk.nodes.Node method) get_cif_string() (abipy.dfpt.msqdos.MsqDos method) get_cluster_graph() (abipy.flowtk.utils.Dirviz method) get_coarse() (abipy.dfpt.ddb.DdbFile method) get_collection() (abipy.flowtk.tasks.TaskManager method) get_collinear_mag() (abipy.electrons.ebands.ElectronBands method) get_compare_params_widgets() (abipy.panels.core.BaseRobotPanel method) get_computed_entry() (abipy.electrons.gsr.GsrFile method) get_conventional_standard_structure() (abipy.core.structure.Structure method) get_coords_dataframe() (abipy.abio.robots.Robot method) get_crystaltk_view() (abipy.core.structure.Structure method) get_cv() (abipy.dfpt.phonons.PhononDos method) (in module abipy.dfpt.qha) get_dataframe() (abipy.abio.outputs.AboRobot method) (abipy.dfpt.anaddbnc.AnaddbNcRobot method) (abipy.dfpt.msqdos.MsqDos method) (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.vsound.SoundVelocity method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.gw.SigresRobot method) (abipy.eph.a2f.A2fRobot method) (abipy.eph.sigeph.QpTempState method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) (abipy.wannier90.abiwan.AbiwanRobot method) get_dataframe_at_qpoint() (abipy.dfpt.ddb.DdbRobot method) get_dataframe_sk() (abipy.electrons.gw.SigresFile method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) get_dataframe_with_accuracies() (abipy.electrons.effmass_analyzer.Segment method) get_default() (abipy.abio.inputs.OpticInput method) get_delta_etime() (abipy.flowtk.launcher.PyFlowScheduler method) get_dict4pandas() (abipy.core.structure.Structure method) (abipy.dfpt.phonons.PhononBands method) (abipy.electrons.ebands.ElectronBands method) get_dict_for_mongodb_queries() (abipy.flowtk.flows.Flow method) get_dims_dataframe() (abipy.abio.outputs.AboRobot method) (abipy.core.mixins.AbinitNcFile method) (abipy.flowtk.flows.Flow method) get_dims_spginfo_dataframe() (abipy.abio.outputs.AbinitOutputFile method) get_dims_spginfo_dataset() (abipy.abio.outputs.AbinitOutputFile method) get_dirgaps_dataframe() (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) get_dm() (in module abipy.dfpt.converters) get_dos_integrator() (abipy.electrons.fatbands.FatBandsFile method) get_dyn_mat_eigenvec() (in module abipy.dfpt.phtk) get_e0() (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronDos method) get_e0mesh() (abipy.eph.sigeph.QpTempList method) get_ebands3d() (abipy.electrons.ebands.ElectronBands method) get_ebands_frame() (abipy.electrons.ebands.ElectronBandsPlotter method) get_ebands_from_file_input() (abipy.panels.core.AbipyParameterized method) get_ebands_kpath() (abipy.panels.core.PanelWithElectronBands method) get_ebands_params() (abipy.core.mixins.Has_ElectronBands method) get_ebands_plotter() (abipy.eph.sigeph.TdepElectronBands method) get_ebands_plotter_widgets() (abipy.panels.core.PanelWithEbandsRobot method) get_edos() (abipy.core.mixins.Has_ElectronBands method) (abipy.core.skw.ElectronInterpolator method) (abipy.electrons.ebands.ElectronBands method) get_edos_plotter() (abipy.eph.sigeph.TdepElectronBands method) get_edos_plotter_widgets() (abipy.panels.core.PanelWithEbandsRobot method) get_effmass_line() (abipy.electrons.ebands.ElectronBands method) get_ejdos() (abipy.electrons.ebands.ElectronBands method) get_elastic_dataframe() (abipy.dfpt.anaddbnc.AnaddbNcRobot method) get_elastic_properties_dataframe() (abipy.dfpt.elastic.ElasticData method) get_elastic_tensor_dataframe() (abipy.dfpt.elastic.ElasticData method) get_elastic_voigt_dataframe() (abipy.dfpt.elastic.ElasticData method) get_entropy() (abipy.dfpt.phonons.PhononDos method) (in module abipy.dfpt.qha) get_epsinf() (abipy.panels.ddb.DdbFilePanel method) get_event_handler_classes() (in module abipy.flowtk.events) get_fd_emass_d2() (abipy.electrons.effmass_analyzer.Segment method) get_field_itemp() (abipy.eph.sigeph.QpTempList method) get_fields() (abipy.electrons.gw.QPState class method) (abipy.eph.sigeph.QpTempState class method) get_fields_for_plot() (abipy.electrons.gw.QPState class method) (abipy.eph.sigeph.QpTempState class method) get_fig_mlab() (in module abipy.display.mvtk) get_fileinput_section() (abipy.panels.core.AbipyParameterized static method) get_filepaths_and_exts() (abipy.flowtk.nodes.Dependency method) get_final_structure() (abipy.flowtk.tasks.RelaxTask method) get_fit_gaps_vs_ecuteps() (abipy.electrons.gw.SigresRobot method) get_free_energy() (abipy.dfpt.phonons.PhononDos method) (in module abipy.dfpt.qha) get_frozen_phonons() (abipy.dfpt.phonons.PhononBands method) get_fstats_dict() (abipy.dynamics.hist.HistFile method) get_gaps_string() (abipy.electrons.ebands.ElectronBands method) get_graphviz() (abipy.flowtk.flows.Flow method) get_graphviz_dirtree() (abipy.flowtk.nodes.Node method) get_gs_input() (abipy.panels.structure.StructurePanel method) get_gsinput_alas_ngkpt() (abipy.core.testing.AbipyTest static method) get_gsinput_si() (abipy.core.testing.AbipyTest static method) get_highsym_datataframe() (abipy.core.kpoints.KpointList method) get_ifc_cartesian() (abipy.dfpt.ifc.InteratomicForceConstants method) get_ifc_local() (abipy.dfpt.ifc.InteratomicForceConstants method) get_info() (abipy.flowtk.qjobs.PbsProJob method) (abipy.flowtk.qjobs.QueueJob method) (abipy.flowtk.qjobs.SlurmJob method) get_internal_energy() (abipy.dfpt.phonons.PhononDos method) get_interpolated_ebands_plotter() (abipy.wannier90.abiwan.AbiwanRobot method) get_interpolator() (abipy.waves.pwwave.PWWaveFunction method) get_jsmol_view() (abipy.core.structure.Structure method) get_json_doc() (abipy.dfpt.msqdos.MsqDos method) get_k2kqg_map() (abipy.core.kpoints.KpointList method) get_kcoords_from_names() (abipy.core.structure.Structure method) get_kpath() (abipy.panels.structure.StructurePanel method) get_kpath_input_string() (abipy.core.structure.Structure method) get_kpoints_and_band_range_for_edges() (abipy.electrons.ebands.ElectronBands method) get_label_files_str() (abipy.abio.robots.Robot method) get_labelstyle_from_spin_pair() (abipy.electrons.lobster.CoxpFile method) get_labelstyle_from_spin_pair_orbs() (abipy.electrons.lobster.CoxpFile method) get_lattice_dataframe() (abipy.abio.robots.Robot method) get_lifetimes_boltztrap() (abipy.eph.sigeph.SigEPhFile method) get_linewidth_dos() (abipy.eph.sigeph.SigEPhFile method) get_linopt_latex_label() (abipy.electrons.optic.OpticNcFile static method) get_lnlist_for_type() (abipy.electrons.psps.PspsReader method) get_longitudinal_fraction() (abipy.dfpt.phonons.PhononBands method) get_lorentz_intensity() (abipy.dfpt.raman.Raman method) get_marker() (abipy.electrons.gw.SigresFile method) get_maxfreq_mode() (abipy.dfpt.phonons.PhononBands method) get_mcmillan_tc() (abipy.eph.a2f.A2f method) get_mdf() (abipy.electrons.bse.MdfFile method) get_mdf_robot() (abipy.flowtk.works.BseMdfWork method) get_message() (abipy.flowtk.nodes.HistoryRecord method) get_minfreq_mode() (abipy.dfpt.phonons.PhononBands method) get_mobility_mu() (abipy.eph.rta.RtaFile method) (abipy.eph.transportfile.TransportFile method) get_mock_module() (abipy.core.testing.AbipyTest static method) get_modes_intensities() (abipy.dfpt.raman.Raman method) get_moment() (abipy.eph.a2f.A2f method) get_moment_nu() (abipy.eph.a2f.A2f method) get_mongo_info() (abipy.flowtk.flows.Flow method) get_mprester() (in module abipy.core.restapi) get_msq_tmesh() (abipy.dfpt.msqdos.MsqDos method) get_mustar_from_tc() (abipy.eph.a2f.A2f method) get_ncfile_panel() (abipy.panels.core.NcFileMixin method) get_nelect() (abipy.core.fields.Density method)

get_newnode_id() (in module abipy.flowtk.nodes) get_ngkpt_shiftk() (abipy.abio.inputs.AbinitInput method) get_ngl_view() (abipy.core.structure.Structure method) get_njobs_in_queue() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.TaskManager method) get_nodes() (abipy.flowtk.qjobs.QueueJob method) get_ordered_with_policy() (abipy.flowtk.tasks.ParalHints method) get_oscillator_dataframe() (abipy.dfpt.ddb.DielectricTensorGenerator method) get_oxi_state_decorated() (abipy.core.structure.Structure method) get_panel() (abipy.abio.outputs.AbinitOutputFile method) (abipy.core.structure.Structure method) (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.ddb.DdbRobot method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.gsr.GsrFile method) (abipy.eph.sigeph.SigEPhFile method) (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.works.Work method) (abipy.panels.ddb.CompareDdbWithMP method) (abipy.panels.ddb.DdbFilePanel method) (abipy.panels.ddb.DdbPanelWithFileInput method) (abipy.panels.ddb.DdbRobotPanel method) (abipy.panels.ddb.PanelWithFileInput method) (abipy.panels.ddb.RobotWithFileInput method) (abipy.panels.fatbands.FatBandsFilePanel method) (abipy.panels.flows.FlowPanel method) (abipy.panels.gsr.GsrFilePanel method) (abipy.panels.gsr.GsrRobotPanel method) (abipy.panels.hist.HistFilePanel method) (abipy.panels.outputs.AbinitOutputFilePanel method) (abipy.panels.outputs.AbinitOutputFilePanelWithFileInput method) (abipy.panels.phonons.PhononBandsPlotterPanel method) (abipy.panels.structure.InputFileGenerator method) (abipy.panels.structure.StructurePanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) get_params_dataframe() (abipy.abio.robots.Robot method) get_parents() (abipy.flowtk.nodes.Node method) get_phasediagram_results() (abipy.core.restapi.MyMPRester method) get_phbands_frame() (abipy.dfpt.phonons.PhononBandsPlotter method) get_phbands_params() (abipy.core.mixins.Has_PhononBands method) get_phdos() (abipy.dfpt.phonons.PhononBands method) get_phframe() (abipy.dfpt.phonons.PhbstFile method) get_phmode() (abipy.dfpt.phonons.PhbstFile method) get_phonopy_qha() (abipy.dfpt.qha.AbstractQHA method) get_piezo_voigt_dataframe() (abipy.dfpt.elastic.ElasticData method) get_piezoelectric_tensor_dataframe() (abipy.dfpt.elastic.ElasticData method) get_plot_ebands_widgets() (abipy.panels.core.PanelWithElectronBands method) get_plot_edos_widgets() (abipy.panels.core.PanelWithElectronBands method) get_plot_fermi_surface_widgets() (abipy.panels.core.PanelWithElectronBands method) get_plot_ifc() (abipy.dfpt.ifc.InteratomicForceConstants method) get_plot_skw_widgets() (abipy.panels.core.PanelWithElectronBands method) get_plotter() (abipy.dfpt.gruneisen.GrunsNcFile method) get_plotter_from_ebands() (abipy.wannier90.abiwan.AbiwanFile method) get_plotter_with() (abipy.electrons.ebands.ElectronBands method) get_points_from_ebands() (abipy.electrons.gw.SigresFile method) get_powder_intensity() (abipy.dfpt.raman.Raman method) get_powder_lorentz_intensity() (abipy.dfpt.raman.Raman method) get_qp_array() (abipy.eph.sigeph.SigEPhFile method) get_qpcorr() (abipy.electrons.gw.SigresFile method) get_qpgap() (abipy.electrons.gw.SigresFile method) get_qpgaps_dataframe() (abipy.electrons.gw.SigresRobot method) get_qplist() (abipy.electrons.gw.SigresFile method) get_relaxation_analyzer() (abipy.dynamics.hist.HistFile method) get_results() (abipy.flowtk.flows.Flow method) (abipy.flowtk.nodes.FileNode method) (abipy.flowtk.tasks.AnaddbTask method) (abipy.flowtk.tasks.DdkTask method) (abipy.flowtk.tasks.NscfTask method) (abipy.flowtk.tasks.OpticTask method) (abipy.flowtk.tasks.PhononTask method) (abipy.flowtk.tasks.RelaxTask method) (abipy.flowtk.tasks.ScfTask method) (abipy.flowtk.tasks.SigmaTask method) get_same_tmesh() (abipy.eph.rta.RtaRobot method) get_sampling() (abipy.core.skw.ElectronInterpolator method) get_scissors_builder() (abipy.flowtk.tasks.SigmaTask method) get_script_str() (abipy.flowtk.launcher.ScriptEditor method) get_sigeph_skb() (abipy.eph.sigeph.SigEPhFile method) get_sigma_skb_kpoint() (abipy.eph.sigeph.SigmaPhReader method) get_simple_manager() (abipy.flowtk.tasks.TaskManager class method) get_smallest_supercell() (abipy.core.structure.Structure method) get_software_stack() (abipy.panels.core.AbipyParameterized static method) get_sorted_structure_z() (abipy.core.structure.Structure method) get_spectral_functions() (abipy.electrons.fold2bloch.Fold2BlochNcfile method) get_spglib_hall_number() (abipy.core.symmetries.AbinitSpaceGroup method) get_spilling() (abipy.electrons.fatbands.FatBandsFile method) get_stark() (abipy.core.skw.SkwInterpolator method) get_stark_dk1() (abipy.core.skw.SkwInterpolator method) get_stark_dk2() (abipy.core.skw.SkwInterpolator method) get_stat() (abipy.flowtk.utils.File method) get_stats() (abipy.flowtk.qjobs.QueueJob method) (abipy.flowtk.qjobs.SlurmJob method) get_string() (abipy.dfpt.ddb.DdbFile method) get_struct_view_tab_entry() (abipy.panels.core.PanelWithStructure method) get_structure_dataframes() (abipy.abio.robots.Robot method) get_structure_info() (abipy.panels.core.PanelWithStructure method) (in module abipy.panels.core) get_supported_extensions() (abipy.abio.robots.Robot class method) get_symb2coords_dataframe() (abipy.core.structure.Structure method) get_symbol2coords() (abipy.core.structure.Structure method) get_symbol2indices() (abipy.core.structure.Structure method) get_t_for_vols() (abipy.dfpt.qha.AbstractQHA method) get_task_scfcycles() (abipy.flowtk.flows.Flow method) get_template_cls_from_name() (abipy.panels.core.AbipyParameterized static method) (in module abipy.panels.core) get_template_from_tabs() (abipy.panels.core.AbipyParameterized method) get_tensor() (abipy.dfpt.elastic.ElasticData method) (abipy.electrons.bse.MdfFile method) get_tensor_rank2_dataframe() (abipy.core.site_symmetries.SiteSymmetries method) get_thermal_expansion_coeff() (abipy.dfpt.qha.AbstractQHA method) get_thermodynamic_properties() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.QHA method) (abipy.dfpt.qha.QHA3P method) (abipy.dfpt.qha.QHA3PF method) get_time_dataframe() (abipy.abio.outputs.AboRobot method) get_timer() (abipy.abio.outputs.AbinitTextFile method) get_tmpname() (abipy.core.testing.AbipyTest static method) get_trans_vect() (abipy.core.structure.Structure method) get_unstable_modes() (abipy.dfpt.phonons.PhononBands method) get_value() (abipy.abio.variable.InputVariable method) get_vars_dataframe() (abipy.abio.inputs.MultiDataset method) (abipy.flowtk.nodes.Node method) get_vib_free_energies() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.QHA method) (abipy.dfpt.qha.QHA3P method) (abipy.dfpt.qha.QHA3PF method) get_voigt_dataframe() (abipy.dfpt.ddb.Becs method) (abipy.dfpt.elastic.ElasticData method) (abipy.dfpt.elastic.MyElasticTensor method) (abipy.dfpt.elastic.MyPiezoTensor method) get_vol_at_t() (abipy.dfpt.qha.AbstractQHA method) get_w_symbol() (abipy.electrons.fatbands.FatBandsFile method) get_wave() (abipy.waves.wfkfile.WfkFile method) get_wl_atom() (abipy.electrons.fatbands.FatBandsFile method) get_wl_symbol() (abipy.electrons.fatbands.FatBandsFile method) get_workdir() (in module abipy.core.globals) get_wyckoff_dataframe() (abipy.core.site_symmetries.SiteSymmetries method) get_zero_point_energy() (in module abipy.dfpt.qha) getattrd() (in module abipy.tools.duck) getnwrite_eosdata() (abipy.flowtk.gs_works.EosWork method) getsize() (abipy.flowtk.utils.File method) gkk_filepath() (abipy.flowtk.tasks.AnaddbTask property) GKKPWork (class in abipy.flowtk.works) GkqPathFlow (class in abipy.flowtk.eph_flows) glr_frohlich() (in module abipy.eph.common) gmods() (abipy.core.mesh3d.Mesh3D method) graphviz_imshow() (abipy.flowtk.flows.Flow method) grid (abipy.core.kpoints.Ktables attribute) gridfs_files() (abipy.flowtk.nodes.NodeResults property) GridFsFile (class in abipy.flowtk.nodes) gridplot() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDosPlotter method) gridplot_a2f() (abipy.eph.a2f.A2fRobot method) gridplot_with_hue() (abipy.dfpt.phonons.PhononBandsPlotter method) gridplotly() (abipy.dfpt.phonons.PhononBandsPlotter method) group_and_sortby() (abipy.abio.robots.Robot method) groupby_status() (abipy.flowtk.flows.Flow method) groupby_task_class() (abipy.flowtk.flows.Flow method) grouper() (in module abipy.tools.numtools) grun_vals_finite_differences() (abipy.dfpt.gruneisen.GrunsNcFile method) GruneisenWork (class in abipy.flowtk.gruneisen) GrunsNcFile (class in abipy.dfpt.gruneisen) GrunsReader (class in abipy.dfpt.gruneisen) gs_input() (in module abipy.abio.factories) GSphere (class in abipy.core.gsphere) gspheres() (abipy.waves.wfkfile.WfkFile property) GsrFile (class in abipy.electrons.gsr) GsrFilePanel (class in abipy.panels.gsr) GsrRobotPanel (class in abipy.panels.gsr) guessed_ngqpt() (abipy.dfpt.ddb.DdbFile method) gvals_qibz() (abipy.dfpt.gruneisen.GrunsNcFile method) gvals_qibz_finite_differences() (abipy.dfpt.gruneisen.GrunsNcFile method) gvecs() (abipy.core.gsphere.GSphere property) (abipy.core.mesh3d.Mesh3D method) gwnlf_mdf() (abipy.electrons.bse.MdfFile method)

H

h() (abipy.core.func1d.Function1D method) handle_input_event() (abipy.flowtk.events.DilatmxErrorHandler method) handle_task_event() (abipy.flowtk.events.DilatmxErrorHandler method) has_a2ftr() (abipy.eph.a2f.A2fFile method) has_abi_spacegroup() (abipy.core.structure.Structure property) has_abiext() (abipy.flowtk.utils.Directory method) has_abinit() (abipy.core.testing.AbipyTest static method) has_ase() (abipy.core.testing.AbipyTest static method) has_at_least_one_atomic_perturbation() (abipy.dfpt.ddb.DdbFile method) has_bec_terms() (abipy.dfpt.ddb.DdbFile method) has_bzmesh() (abipy.electrons.ebands.ElectronBands method) has_bzpath() (abipy.electrons.ebands.ElectronBands method) has_chrooted() (abipy.flowtk.flows.Flow property) has_db() (abipy.flowtk.flows.Flow property) (abipy.flowtk.tasks.TaskManager property) has_different_structures() (abipy.abio.robots.Robot method) has_direction() (abipy.dfpt.phtk.NonAnalyticalPh method) has_elastic_data() (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.anaddbnc.AnaddbNcRobot property) Has_ElectronBands (class in abipy.core.mixins) has_eliashberg_function() (abipy.eph.sigeph.SigEPhFile method) has_emacro_terms() (abipy.dfpt.ddb.DdbFile method) has_epsinf_terms() (abipy.dfpt.ddb.DdbFile method) has_graphviz() (abipy.core.testing.AbipyTest method) Has_Header (class in abipy.core.mixins) has_ibte() (abipy.eph.rta.RtaFile method) has_internalstrain_terms() (abipy.dfpt.ddb.DdbFile method) has_ipywidgets() (abipy.core.testing.AbipyTest static method) has_kmesh() (abipy.eph.sigeph.TdepElectronBands method) has_kpath() (abipy.eph.sigeph.TdepElectronBands method) has_leo() (abipy.electrons.optic.OpticNcFile method) has_libxc (abipy.flowtk.tasks.AbinitBuild attribute) has_linewidths() (abipy.dfpt.phonons.PhononBands property) (abipy.electrons.ebands.ElectronBands property) has_linopt() (abipy.electrons.optic.OpticNcFile method) has_lo_to_data() (abipy.dfpt.ddb.DdbFile method) has_matplotlib() (abipy.core.testing.AbipyTest static method) has_mayavi() (abipy.core.testing.AbipyTest static method) has_metallic_scheme() (abipy.electrons.ebands.ElectronBands property) has_mpi (abipy.flowtk.tasks.AbinitBuild attribute) has_mpiio (abipy.flowtk.tasks.AbinitBuild attribute) has_multi_structures() (abipy.abio.abivars.AbinitInputFile method) has_nbformat() (abipy.core.testing.AbipyTest static method) has_netcdf (abipy.flowtk.tasks.AbinitBuild attribute) has_networkx() (abipy.core.testing.AbipyTest method) has_node_failures() (abipy.flowtk.qjobs.QueueJob property) has_omp (abipy.flowtk.tasks.AbinitBuild attribute) has_omp() (abipy.flowtk.tasks.TaskManager property) has_panel() (abipy.core.testing.AbipyTest method)

Has_PhononBands (class in abipy.core.mixins) has_phonopy() (abipy.core.testing.AbipyTest method) has_piezoelectric_data() (abipy.dfpt.anaddbnc.AnaddbNcFile method) has_piezoelectric_terms() (abipy.dfpt.ddb.DdbFile method) has_plotly() (abipy.core.testing.AbipyTest static method) has_python_graphviz() (abipy.core.testing.AbipyTest static method) has_qpoint() (abipy.dfpt.ddb.DdbFile method) has_queue() (abipy.flowtk.tasks.TaskManager property) has_remote_server (abipy.panels.core.AbipyParameterized attribute) has_same_final_structures() (abipy.abio.outputs.AbinitOutputFile property) has_same_formula() (abipy.dfpt.phonons.PhononBandsPlotter method) has_same_initial_structures() (abipy.abio.outputs.AbinitOutputFile property) has_same_mesh() (abipy.core.func1d.Function1D method) has_same_structures() (abipy.abio.inputs.MultiDataset property) has_scheduler() (abipy.flowtk.flows.Flow property) has_seaborn() (abipy.core.testing.AbipyTest static method) has_shg() (abipy.electrons.optic.OpticNcFile method) has_skimage() (abipy.core.testing.AbipyTest static method) has_spectral_function() (abipy.electrons.gw.SigresFile property) (abipy.eph.sigeph.SigEPhFile method) has_strain_terms() (abipy.dfpt.ddb.DdbFile method) Has_Structure (class in abipy.core.mixins) has_timerev() (abipy.core.symmetries.AbinitSpaceGroup property) has_timrev() (abipy.electrons.ebands.ElectronBands method) hasattrd() (in module abipy.tools.duck) have_disentangled_spin() (abipy.wannier90.abiwan.AbiwanFile method) hdr() (abipy.core.mixins.Has_Header method) header() (abipy.dfpt.ddb.DdbFile property) helpc() (abipy.panels.core.AbipyParameterized method) hirshfeld() (abipy.abio.inputs.Cut3DInput class method) hirshfeld_from_fhi_path() (abipy.abio.inputs.Cut3DInput class method) HirshfeldCharges (class in abipy.electrons.charges) HistFile (class in abipy.dynamics.hist) HistFilePanel (class in abipy.panels.hist) HistoryRecord (class in abipy.flowtk.nodes) HistReader (class in abipy.dynamics.hist) HistRobot (class in abipy.dynamics.hist) homo_sk() (abipy.electrons.ebands.ElectronBands method) homos() (abipy.electrons.ebands.ElectronBands property) hsym_kpath() (abipy.core.structure.Structure method) hsym_kpoints() (abipy.core.structure.Structure method) hsym_stars() (abipy.core.structure.Structure method) html_link() (abipy.abio.inputs.OpticVar method) html_with_clipboard_btn() (abipy.panels.core.AbipyParameterized static method) HtmlDiff (class in abipy.tools.devtools) HTMLwithClipboardBtn (class in abipy.panels.core) HueGroup (class in abipy.abio.robots) hwan() (abipy.wannier90.abiwan.AbiwanFile method) HWanR (class in abipy.wannier90.abiwan)

I

i_closest_gridpoints() (abipy.core.mesh3d.Mesh3D method) ibz (abipy.core.kpoints.Ktables attribute) ibz2kcalc() (abipy.eph.sigeph.SigEPhFile method) ICoxpFile (class in abipy.electrons.lobster) idos() (abipy.dfpt.phonons.PhononDos method) ieta0() (abipy.dfpt.frozen_phonons.FrozenPhonon method) ifc (abipy.dfpt.anaddbnc.AnaddbNcFile attribute) ifc() (abipy.abio.inputs.AnaddbInput class method) (abipy.dfpt.anaddbnc.AnaddbNcFile method) ifc_cart_coord_ewald() (abipy.dfpt.ifc.InteratomicForceConstants method) ifc_local_coord() (abipy.dfpt.ifc.InteratomicForceConstants method) ifc_local_coord_ewald() (abipy.dfpt.ifc.InteratomicForceConstants method) ifc_local_coord_short_range() (abipy.dfpt.ifc.InteratomicForceConstants method) ifft() (abipy.core.func1d.Function1D method) iflat() (in module abipy.tools.numtools) iflat_nodes() (abipy.flowtk.flows.Flow method) iflat_tasks() (abipy.flowtk.flows.Flow method) iflat_tasks_wti() (abipy.flowtk.flows.Flow method) imag() (abipy.core.func1d.Function1D property) imag_fan0() (abipy.eph.sigeph.QpTempState property) imag_qpe() (abipy.electrons.gw.QPState property) (abipy.eph.sigeph.QpTempState method) imag_sig0() (abipy.eph.sigeph.QpTempState method) in_notebook() (in module abipy.core.globals) in_spectator_mode() (abipy.flowtk.nodes.Node property) increase_mem() (abipy.flowtk.tasks.TaskManager method) increase_ncpus() (abipy.flowtk.tasks.TaskManager method) increase_resources() (abipy.flowtk.tasks.TaskManager method) increase_time() (abipy.flowtk.tasks.TaskManager method) index() (abipy.core.gsphere.GSphere method) (abipy.core.kpoints.KpointList method) index_direction() (abipy.dfpt.phtk.NonAnalyticalPh method) indsym() (abipy.core.structure.Structure property) infinite_flow() (in module abipy.flowtk.mocks) InfiniteFlow (class in abipy.flowtk.mocks) info (abipy.flowtk.tasks.AbinitBuild attribute) info() (abipy.flowtk.nodes.Dependency property) (abipy.flowtk.nodes.NodeHistory method) info_str (abipy.panels.ddb.CompareDdbWithMP attribute) (abipy.panels.ddb.DdbPanelWithFileInput attribute) (abipy.panels.ddb.PanelWithFileInput attribute) (abipy.panels.ddb.PanelWithStructureInput attribute) (abipy.panels.ddb.RobotWithFileInput attribute) (abipy.panels.outputs.AbinitOutputFilePanelWithFileInput attribute) (abipy.panels.structure.InputFileGenerator attribute) init_counter() (in module abipy.flowtk.nodes) initial_structure() (abipy.abio.outputs.AbinitOutputFile method) (abipy.dynamics.hist.HistFile property) initial_structures() (abipy.abio.outputs.AbinitOutputFile method) input_from_editor() (in module abipy.tools.iotools) InputDecoratorError InputFileGenerator (class in abipy.panels.structure) InputVariable (class in abipy.abio.variable) insert_block() (abipy.dfpt.ddb.DdbFile method) inspect() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.PhononTask method) (abipy.flowtk.tasks.RelaxTask method) (abipy.flowtk.tasks.ScfTask method) install_config_files() (in module abipy.abilab) install_event_handlers() (abipy.flowtk.nodes.Node method) integral() (abipy.core.func1d.Function1D method) integral_value() (abipy.core.func1d.Function1D method) integrate() (abipy.core.mesh3d.Mesh3D method) InteratomicForceConstants (class in abipy.dfpt.ifc) interp_kpts() (abipy.core.skw.ElectronInterpolator method) interp_kpts_and_enforce_degs() (abipy.core.skw.ElectronInterpolator method) interpolate() (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.gw.SigresFile method) (abipy.eph.sigeph.SigEPhFile method) interpolate_ebands() (abipy.wannier90.abiwan.AbiwanFile method) inv_vectors() (abipy.core.mesh3d.Mesh3D method) inverse() (abipy.core.symmetries.LatticeRotation method) InverseDielectricFunction (class in abipy.electrons.scr) ion_ioncell_relax_and_ebands_input() (in module abipy.abio.factories)

ion_ioncell_relax_input() (in module abipy.abio.factories) ipath_from_ext() (abipy.flowtk.works.Work method) ipw_edos_widget() (abipy.electrons.ebands.ElectronBands method) ipw_harmonic_thermo() (abipy.dfpt.phonons.PhononDosPlotter method) ipw_listdir() (in module abipy.tools.notebooks) ipw_select_plot() (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.electrons.bse.MultipleMdfPlotter method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDosPlotter method) ipw_visualize_widget() (abipy.waves.wfkfile.WfkFile method) irdvars_for_ext() (in module abipy.flowtk.utils) IrredZone (class in abipy.core.kpoints) irvec() (abipy.wannier90.abiwan.AbiwanFile method) is_abiunit() (in module abipy.abio.abivars) is_abivar() (in module abipy.abio.abivars) is_available() (abipy.iotools.visualizer.Visualizer property) is_completed() (abipy.flowtk.qjobs.QueueJob property) is_critical() (abipy.flowtk.nodes.Status property) is_dfpt_task() (abipy.flowtk.tasks.AbinitTask property) is_diagonal() (in module abipy.tools.numtools) is_failed() (abipy.flowtk.qjobs.QueueJob property) is_file() (abipy.flowtk.nodes.Node property) is_flow() (abipy.flowtk.nodes.Node property) is_gamma() (abipy.core.kpoints.Kpoint method) is_gs_task() (abipy.flowtk.tasks.AbinitTask property) is_ibz() (abipy.core.kpoints.KpointList property) is_input() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.MultiDataset property) is_intlike() (in module abipy.tools.duck) is_listlike() (in module abipy.tools.duck) is_macosx_app (abipy.iotools.visualizer.Visualizer attribute) is_mpmesh() (abipy.core.kpoints.KpointList property) is_multidataset() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.MultiDataset property) is_number_like() (in module abipy.tools.duck) is_path() (abipy.core.kpoints.KpointList property) is_proper() (abipy.core.symmetries.LatticeRotation method) is_running() (abipy.flowtk.qjobs.QueueJob property) is_scf_run() (abipy.electrons.gsr.GsrFile method) is_shift (abipy.core.kpoints.Ktables attribute) is_sortable() (abipy.abio.robots.Robot method) is_string() (in module abipy.tools.duck) is_symmorphic() (abipy.core.symmetries.AbinitSpaceGroup method) is_task() (abipy.flowtk.nodes.Node property) is_work() (abipy.flowtk.nodes.Node property) isabifile() (in module abipy.abilab) iscomplexobj() (abipy.core.func1d.Function1D property) isE() (abipy.core.symmetries.LatticeRotation method) isI() (abipy.core.symmetries.LatticeRotation method) isinstance() (abipy.flowtk.nodes.Node method) isnc() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.MultiDataset property) (abipy.flowtk.tasks.AbinitTask property) (abipy.flowtk.works.Work property) isncfile() (abipy.flowtk.utils.File property) ispaw() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.MultiDataset property) (abipy.flowtk.tasks.AbinitTask property) (abipy.flowtk.works.Work property) issamek() (in module abipy.core.kpoints) items() (abipy.abio.robots.Robot method) (abipy.tools.plotting.ArrayPlotter method) iter_fftalgs() (abipy.tools.fftprof.FFTBenchmark method) iter_ixyz_r() (abipy.core.mesh3d.Mesh3D method) iter_lineopt() (abipy.abio.robots.Robot method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.electrons.ebands.ElectronBandsPlotter method) iter_lineopt_plotly() (abipy.dfpt.phonons.PhononBandsPlotter method) itup2s() (in module abipy.core.abinit_units) iv0() (abipy.dfpt.gruneisen.GrunsNcFile property) iw0() (abipy.dfpt.phonons.PhononDos method) (abipy.eph.a2f.A2f method) (abipy.eph.a2f.A2Ftr method)

J

JobStatus (class in abipy.flowtk.qjobs) jsmol_html() (in module abipy.panels.core) json_dump() (abipy.flowtk.nodes.NodeResults method)

json_load() (abipy.flowtk.nodes.NodeResults class method) json_read_abinit_input() (abipy.core.testing.AbipyTest static method) JSON_SCHEMA (abipy.flowtk.nodes.NodeResults attribute)

K

kappa() (in module abipy.electrons.optic) kcalc2ibz() (abipy.eph.sigeph.SigEPhFile method) KerangeTask (class in abipy.flowtk.tasks) keys() (abipy.abio.robots.Robot method) (abipy.tools.plotting.ArrayPlotter method) kidxs() (abipy.electrons.ebands.ElectronBands property) kindex() (abipy.electrons.ebands.ElectronBands method) (abipy.waves.wfkfile.WfkFile method) kmesh_from_mpdivs() (in module abipy.core.kpoints) Kpath (class in abipy.core.kpoints)

Kpoint (class in abipy.core.kpoints) KpointList (class in abipy.core.kpoints) kpoints() (abipy.core.mixins.Has_ElectronBands property) (abipy.electrons.scr.ScrFile property) kpoints_from_line_density() (in module abipy.abio.inputs) KpointStar (class in abipy.core.kpoints) kptopt() (abipy.electrons.ebands.ElectronBands method) ks_dirgaps() (abipy.eph.sigeph.SigEPhFile method) Ktables (class in abipy.core.kpoints) kwargs_for_anaget_phbst_and_phdos_files() (abipy.panels.ddb.DdbRobotPanel method) (abipy.panels.ddb.PanelWithAnaddbParams method)

L

l1_norm() (abipy.core.func1d.Function1D method) l2_norm() (abipy.core.func1d.Function1D method) l2color (abipy.electrons.fatbands.FatBandsFile attribute) l2tex (abipy.electrons.fatbands.FatBandsFile attribute) labels() (abipy.abio.robots.Robot property) lambda_iso() (abipy.eph.a2f.A2f method) latex_formula() (abipy.core.structure.Structure property) latex_label (abipy.core.fields.Density attribute) (abipy.core.fields.VhartreePotential attribute) (abipy.core.fields.VhxcPotential attribute) (abipy.core.fields.VksPotential attribute) (abipy.core.fields.VxcPotential attribute) latex_name (abipy.electrons.scr.DielectricFunction attribute) (abipy.electrons.scr.InverseDielectricFunction attribute) (abipy.electrons.scr.Polarizability attribute) latex_symbol (abipy.eph.sigeph.EphSelfEnergy attribute) lattice() (abipy.core.kpoints.Kpoint property) lattice_dataframe() (abipy.core.restapi.DatabaseStructures property) lattice_vectors() (abipy.core.structure.Structure method) LatticeRotation (class in abipy.core.symmetries) launch() (abipy.flowtk.tasks.TaskManager method) LdaUDecorator (class in abipy.abio.decorators) LdauParams (class in abipy.flowtk.abiobjects) levelname (abipy.flowtk.nodes.HistoryRecord attribute) levelno (abipy.flowtk.nodes.HistoryRecord attribute) lexx_for_symbol() (abipy.flowtk.abiobjects.LexxParams method) LexxDecorator (class in abipy.abio.decorators) LexxParams (class in abipy.flowtk.abiobjects) likely_code_error() (abipy.flowtk.qjobs.QueueJob method) linecolor (abipy.electrons.fatbands.FatBandsFile attribute)

lineno (abipy.flowtk.nodes.HistoryRecord attribute) lines() (abipy.core.kpoints.Kpath method) linestyle_qsamp (abipy.eph.a2f.A2fRobot attribute) linestyles_der (abipy.electrons.psps.PspsFile attribute) linewidth (abipy.electrons.fatbands.FatBandsFile attribute) linewidth_slider() (in module abipy.display.utils) linewidths() (abipy.dfpt.phonons.PhononBands property) (abipy.electrons.ebands.ElectronBands property) linspace() (abipy.abio.inputs.AbinitInput method) list_filepaths() (abipy.flowtk.utils.Directory method) list_ints() (in module abipy.tools.duck) listext() (abipy.flowtk.flows.Flow method) lo_to_splitting (abipy.panels.ddb.PanelWithAnaddbParams attribute) load_module() (abipy.flowtk.launcher.ScriptEditor method) load_modules() (abipy.flowtk.launcher.ScriptEditor method) Loading (class in abipy.panels.core) LobsterAnalyzer (class in abipy.electrons.lobster) LobsterDoscarFile (class in abipy.electrons.lobster) LobsterInput (class in abipy.electrons.lobster) log_correction() (abipy.flowtk.nodes.Node method) lomo_sk() (abipy.electrons.ebands.ElectronBands method) lomos() (abipy.electrons.ebands.ElectronBands property) look_before_you_leap() (abipy.flowtk.flows.Flow method) lorentzian() (in module abipy.tools.numtools) luj_for_symbol() (abipy.flowtk.abiobjects.LdauParams method) LujForSpecie (class in abipy.flowtk.abiobjects) LumiWork (class in abipy.flowtk.lumi_works) lumo_sk() (abipy.electrons.ebands.ElectronBands method) lumos() (abipy.electrons.ebands.ElectronBands property) lwindow() (abipy.wannier90.abiwan.AbiwanFile method)

M

magnetization() (abipy.core.fields.Density method) magnetization_field() (abipy.core.fields.Density method) make_bec_inputs() (abipy.abio.inputs.AbinitInput method) make_dde_inputs() (abipy.abio.inputs.AbinitInput method) make_ddk_inputs() (abipy.abio.inputs.AbinitInput method) make_dfpt_effmass_inputs() (abipy.abio.inputs.AbinitInput method) make_dir() (abipy.flowtk.utils.File method) make_dkdk_input() (abipy.abio.inputs.AbinitInput method) make_dte_inputs() (abipy.abio.inputs.AbinitInput method) make_ebands_input() (abipy.abio.inputs.AbinitInput method) make_edos_input() (abipy.abio.inputs.AbinitInput method) make_eph_transport_input() (abipy.abio.inputs.AbinitInput method) make_input() (abipy.flowtk.tasks.OpticTask method) make_isodistort_ph_dir() (abipy.dfpt.phonons.PhononBands method) make_light_tarfile() (abipy.flowtk.flows.Flow method) make_links() (abipy.flowtk.tasks.AnaddbTask method) (abipy.flowtk.tasks.OpticTask method) make_nscf_kptopt0_input() (abipy.abio.inputs.AbinitInput method) make_ph_inputs_qpoint() (abipy.abio.inputs.AbinitInput method) make_qadapter() (in module abipy.flowtk.qadapters) make_quad_input() (abipy.abio.inputs.AbinitInput method) make_scheduler() (abipy.flowtk.flows.Flow method) make_strain_perts_inputs() (abipy.abio.inputs.AbinitInput method) make_tarfile() (abipy.flowtk.flows.Flow method) make_targz() (abipy.abio.inputs.AbstractInput method) (abipy.abio.inputs.MultiDataset method) make_wfk_kerange_inputs() (abipy.abio.inputs.AbinitInput method) makedirs() (abipy.flowtk.utils.Directory method) map2rpn() (in module abipy.flowtk.utils) Marker (class in abipy.tools.plotting) marker_qsamp (abipy.eph.a2f.A2fRobot attribute) marker_size (abipy.electrons.fatbands.FatBandsFile attribute) marker_spin (abipy.electrons.fatbands.FatBandsFile attribute) (abipy.electrons.gw.SigresFile attribute) (abipy.eph.a2f.A2f attribute) (abipy.eph.a2f.A2Ftr attribute) (abipy.eph.sigeph.SigEPhFile attribute) marker_spin_plotly (abipy.electrons.fatbands.FatBandsFile attribute) markers_dropdown() (in module abipy.display.utils) mass_factor() (abipy.dfpt.frozen_phonons.FrozenPhonon method) match_eigenvectors() (in module abipy.dfpt.phtk) max() (abipy.core.func1d.Function1D property) max_cores() (abipy.flowtk.tasks.ParalHints method) (abipy.flowtk.tasks.TaskManager property) max_efficiency() (abipy.flowtk.tasks.ParalHints method) max_force() (abipy.electrons.gsr.GsrFile method) max_mem_per_proc() (abipy.flowtk.tasks.ParalHints method) max_speedup() (abipy.flowtk.tasks.ParalHints method) maxfreq() (abipy.dfpt.phonons.PhononBands property) MayaviFieldAnimator (class in abipy.display.mvtk) mband() (abipy.core.mixins.Has_ElectronBands property) md_filepath() (abipy.flowtk.tasks.AnaddbTask property) MDF_TYPECPLX2TEX (abipy.electrons.bse.MultipleMdfPlotter attribute) MDF_TYPES (abipy.electrons.bse.MultipleMdfPlotter attribute) MdfFile (class in abipy.electrons.bse) MdfPlotter (class in abipy.electrons.bse) MdfReader (class in abipy.electrons.bse) mem_per_proc() (abipy.flowtk.tasks.TaskManager property) merge() (abipy.eph.sigeph.QpTempList method) (abipy.flowtk.wrappers.Mrgddb method) (abipy.flowtk.wrappers.Mrgdvdb method) merge_dataframes_sk() (abipy.electrons.gw.SigresRobot method) merge_deps() (abipy.flowtk.nodes.Node method) merge_qpoints() (abipy.flowtk.wrappers.Mrgscr method) merge_scr_files() (abipy.flowtk.gw.ScreeningWork method) merge_scrfiles() (abipy.flowtk.works.QptdmWork method) mesh (abipy.core.kpoints.Ktables attribute) mesh() (abipy.core.func1d.Function1D property) Mesh3D (class in abipy.core.mesh3d) message (abipy.flowtk.nodes.HistoryRecord attribute) min() (abipy.core.func1d.Function1D property) minfreq() (abipy.dfpt.phonons.PhononBands property) minimal_scf_input() (in module abipy.abio.factories) mjson_load() (in module abipy.abilab) mjson_loads() (in module abipy.abilab) mjson_write() (in module abipy.abilab) mkdtemp() (abipy.core.testing.AbipyTest static method) mklabel() (in module abipy.electrons.psps) mnemonics() (abipy.abio.inputs.AbinitInput property) MoabJob (class in abipy.flowtk.qjobs) modes() (abipy.abio.inputs.AnaddbInput class method) modes_at_qpoint() (abipy.abio.inputs.AnaddbInput class method) modes_at_qpoints() (abipy.abio.inputs.AnaddbInput class method) module abipy.abilab abipy.abio abipy.abio.abivars abipy.abio.abivars_db abipy.abio.decorators abipy.abio.factories abipy.abio.input_tags abipy.abio.inputs abipy.abio.outputs abipy.abio.robots abipy.abio.timer abipy.abio.variable abipy.core abipy.core.abinit_units abipy.core.fields abipy.core.func1d abipy.core.globals abipy.core.gsphere abipy.core.irrepsdb abipy.core.kpoints abipy.core.mesh3d abipy.core.mixins abipy.core.restapi abipy.core.site_symmetries abipy.core.skw abipy.core.structure abipy.core.symmetries abipy.core.testing abipy.data abipy.dfpt abipy.dfpt.anaddbnc abipy.dfpt.converters abipy.dfpt.ddb abipy.dfpt.elastic abipy.dfpt.frozen_phonons abipy.dfpt.gruneisen abipy.dfpt.ifc abipy.dfpt.msqdos abipy.dfpt.phonons abipy.dfpt.phtk abipy.dfpt.qha abipy.dfpt.raman abipy.dfpt.vsound abipy.display abipy.display.mvtk abipy.display.utils abipy.dynamics abipy.dynamics.hist abipy.electrons abipy.electrons.bse abipy.electrons.charges abipy.electrons.denpot abipy.electrons.ebands abipy.electrons.effmass_analyzer abipy.electrons.eskw abipy.electrons.fatbands abipy.electrons.fold2bloch abipy.electrons.gsr abipy.electrons.gw abipy.electrons.lobster abipy.electrons.optic abipy.electrons.psps abipy.electrons.scissors abipy.electrons.scr abipy.eph abipy.eph.a2f abipy.eph.common abipy.eph.eph_plotter abipy.eph.rta abipy.eph.sigeph abipy.eph.transportfile abipy.eph.v1sym abipy.eph.wr abipy.flowtk abipy.flowtk.abiinspect abipy.flowtk.abiobjects abipy.flowtk.abiphonopy abipy.flowtk.abitimer abipy.flowtk.dfpt_works abipy.flowtk.effmass_works abipy.flowtk.eph_flows abipy.flowtk.events abipy.flowtk.flows abipy.flowtk.gruneisen abipy.flowtk.gs_works abipy.flowtk.gw abipy.flowtk.launcher abipy.flowtk.lumi_works abipy.flowtk.mocks abipy.flowtk.netcdf abipy.flowtk.nodes abipy.flowtk.pseudos abipy.flowtk.qadapters abipy.flowtk.qha abipy.flowtk.qjobs abipy.flowtk.qutils abipy.flowtk.tasks abipy.flowtk.utils abipy.flowtk.works abipy.flowtk.wrappers abipy.iotools abipy.iotools.visualizer abipy.iotools.xsf abipy.panels abipy.panels.core abipy.panels.ddb abipy.panels.fatbands abipy.panels.flows abipy.panels.gsr abipy.panels.hist abipy.panels.outputs abipy.panels.phonons abipy.panels.structure abipy.panels.tasks abipy.panels.works abipy.tools abipy.tools.bessel abipy.tools.decorators abipy.tools.derivatives abipy.tools.devtools abipy.tools.duck abipy.tools.fftprof abipy.tools.iotools abipy.tools.notebooks abipy.tools.numtools abipy.tools.plotting abipy.tools.tensors abipy.tools.text abipy.wannier90 abipy.wannier90.abiwan abipy.wannier90.win abipy.wannier90.wout abipy.waves abipy.waves.pwwave abipy.waves.wfkfile

module (abipy.flowtk.nodes.HistoryRecord attribute) mongo_assimilate() (abipy.flowtk.flows.Flow method) mongo_id() (abipy.flowtk.flows.Flow property) move() (abipy.flowtk.utils.File method) (abipy.flowtk.works.Work method) mp_match() (abipy.core.structure.Structure method) mp_match_structure() (in module abipy.core.structure) mp_search() (in module abipy.core.structure) mpdivs_shifts() (abipy.core.kpoints.KpointList method) mpi_procs (abipy.panels.core.AbipyParameterized attribute) mpi_procs() (abipy.flowtk.tasks.TaskManager property) mpl() (in module abipy.panels.core) mpl_kwargs() (abipy.panels.core.AbipyParameterized method) MpStructures (class in abipy.core.restapi) Mrgddb (class in abipy.flowtk.wrappers) Mrgdvdb (class in abipy.flowtk.wrappers) Mrgscr (class in abipy.flowtk.wrappers) msqd_dos() (abipy.dfpt.phonons.PhdosFile method) MsqDos (class in abipy.dfpt.msqdos) mu_e() (abipy.eph.sigeph.SigEPhFile method) MultiDataset (class in abipy.abio.inputs) multidimensional_optimization() (abipy.flowtk.tasks.ParalHints method) MultipleMdfPlotter (class in abipy.electrons.bse) mvanimate() (abipy.dynamics.hist.HistFile method) mvplot_trajectories() (abipy.dynamics.hist.HistFile method) mwan() (abipy.wannier90.abiwan.AbiwanFile method) my_depends() (in module abipy.panels.core) MyElasticTensor (class in abipy.dfpt.elastic) MyMarkdown (class in abipy.panels.core) MyMPRester (class in abipy.core.restapi) MyPiezoTensor (class in abipy.dfpt.elastic)

N

n() (in module abipy.electrons.optic) n_directions() (abipy.dfpt.vsound.SoundVelocity property) n_displ() (abipy.dfpt.frozen_phonons.FrozenPhonon property) name (abipy.panels.core.AbipyParameterized attribute) (abipy.panels.core.BaseRobotPanel attribute) (abipy.panels.core.HTMLwithClipboardBtn attribute) (abipy.panels.core.MyMarkdown attribute) (abipy.panels.core.NcFileMixin attribute) (abipy.panels.core.PanelWithEbandsRobot attribute) (abipy.panels.core.PanelWithElectronBands attribute) (abipy.panels.core.PanelWithStructure attribute) (abipy.panels.ddb.CompareDdbWithMP attribute) (abipy.panels.ddb.DdbFilePanel attribute) (abipy.panels.ddb.DdbPanelWithFileInput attribute) (abipy.panels.ddb.DdbRobotPanel attribute) (abipy.panels.ddb.PanelWithAnaddbParams attribute) (abipy.panels.ddb.PanelWithFileInput attribute) (abipy.panels.ddb.PanelWithStructureInput attribute) (abipy.panels.ddb.RobotWithFileInput attribute) (abipy.panels.fatbands.FatBandsFilePanel attribute) (abipy.panels.flows.FlowPanel attribute) (abipy.panels.gsr.GsrFilePanel attribute) (abipy.panels.gsr.GsrRobotPanel attribute) (abipy.panels.hist.HistFilePanel attribute) (abipy.panels.outputs.AbinitOutputFilePanel attribute) (abipy.panels.outputs.AbinitOutputFilePanelWithFileInput attribute) (abipy.panels.phonons.PhononBandsPlotterPanel attribute) (abipy.panels.structure.InputFileGenerator attribute) (abipy.panels.structure.StructurePanel attribute) (abipy.panels.tasks.AbinitTaskPanel attribute) (abipy.panels.works.WorkPanel attribute) name() (abipy.abio.variable.InputVariable property) (abipy.core.kpoints.Kpoint property) (abipy.core.kpoints.KpointStar property) (abipy.core.symmetries.LatticeRotation method) (abipy.flowtk.nodes.Node property) name_tensor_list() (abipy.dfpt.elastic.ElasticData method) names() (abipy.core.kpoints.KpointList property) natom() (abipy.dfpt.ddb.DdbFile property) (abipy.dynamics.hist.HistReader method) natoms() (abipy.dfpt.qha.AbstractQHA property) nband() (abipy.core.mixins.Has_ElectronBands property) (abipy.electrons.ebands.ElectronBands property) nbz (abipy.core.kpoints.Ktables attribute) ncdump() (abipy.core.mixins.AbinitNcFile method) ncfile() (abipy.panels.core.NcFileMixin property) (abipy.panels.fatbands.FatBandsFilePanel property) (abipy.panels.gsr.GsrFilePanel property) NcFileMixin (class in abipy.panels.core) ncores_allocated() (abipy.flowtk.flows.Flow property) ncores_reserved() (abipy.flowtk.flows.Flow property) ncores_used() (abipy.flowtk.flows.Flow property) ndegen() (abipy.wannier90.abiwan.AbiwanFile method) ndivsm (abipy.panels.ddb.PanelWithAnaddbParams attribute) ndtset() (abipy.abio.inputs.MultiDataset property) nelect() (abipy.core.mixins.Has_ElectronBands property) nelect_updown() (abipy.core.fields.Density method) netcdf_name (abipy.core.fields.Density attribute) (abipy.core.fields.VhartreePotential attribute) (abipy.core.fields.VhxcPotential attribute) (abipy.core.fields.VksPotential attribute) (abipy.core.fields.VxcPotential attribute) (abipy.electrons.scr.DielectricFunction attribute) (abipy.electrons.scr.InverseDielectricFunction attribute) (abipy.electrons.scr.Polarizability attribute) netcdf_name() (abipy.electrons.scr.ScrFile property) new_with_decorators() (abipy.abio.inputs.AbinitInput method) new_with_fixed_mpi_omp() (abipy.flowtk.tasks.TaskManager method)

new_with_irred_kpoints() (abipy.electrons.ebands.ElectronBands method) new_with_structure() (abipy.abio.inputs.AbinitInput method) new_with_vars() (abipy.abio.inputs.AbinitInput method) new_work() (abipy.flowtk.flows.Flow method) next_d2de_scf_cycle() (abipy.abio.outputs.AbinitOutputFile method) next_gs_scf_cycle() (abipy.abio.outputs.AbinitOutputFile method) ng() (abipy.electrons.scr.ScrFile property) ngqpt() (abipy.eph.common.BaseEphReader method) nibz (abipy.core.kpoints.Ktables attribute) nimw() (abipy.electrons.scr.ScrFile property) nkpt() (abipy.core.mixins.Has_ElectronBands property) (abipy.waves.wfkfile.WfkFile property) NLOpticalSusceptibilityTensor (class in abipy.tools.tensors) nntot() (abipy.wannier90.abiwan.AbiwanFile method) Node (class in abipy.flowtk.nodes) node() (abipy.flowtk.nodes.Dependency property) node_from_nid() (abipy.flowtk.flows.Flow method) node_id() (abipy.flowtk.nodes.Node property) NodeCorrections (class in abipy.flowtk.nodes) NodeError NoDefaultProvided (class in abipy.tools.duck) NodeHistory (class in abipy.flowtk.nodes) NodeResults (class in abipy.flowtk.nodes) non_anal_directions() (abipy.dfpt.phonons.PhononBands property) non_anal_dyn_mat_eigenvect() (abipy.dfpt.phonons.PhononBands property) non_anal_phdispl_cart() (abipy.dfpt.phonons.PhononBands property) non_anal_phfreqs() (abipy.dfpt.phonons.PhononBands property) NonAnalyticalPh (class in abipy.dfpt.phtk) none_if_masked_array() (abipy.iotools.ETSF_Reader method) norm() (abipy.core.kpoints.Kpoint method) (abipy.core.structure.Structure method) norm2() (abipy.waves.pwwave.PWWaveFunction method) NotebookWriter (class in abipy.core.mixins) nqpt() (abipy.dfpt.phonons.PhononBands property) nqsmall (abipy.panels.ddb.PanelWithAnaddbParams attribute) nrew() (abipy.electrons.scr.ScrFile property) NscfConvergenceWarning (class in abipy.flowtk.events) NscfDdksWork (class in abipy.flowtk.dfpt_works) NscfTask (class in abipy.flowtk.tasks) nspden() (abipy.core.mixins.Has_ElectronBands property) nspinor() (abipy.core.mixins.Has_ElectronBands property) nsppol() (abipy.core.mixins.Has_ElectronBands property) (abipy.electrons.scissors.ScissorsBuilder property) ntemp() (abipy.eph.rta.RtaFile property) (abipy.eph.sigeph.QpTempList property) (abipy.eph.transportfile.TransportFile property) num_cores() (abipy.flowtk.tasks.TaskManager property) num_corrections() (abipy.flowtk.nodes.Node property) num_errored_tasks() (abipy.flowtk.flows.Flow property) num_excs() (abipy.flowtk.launcher.PyFlowScheduler property) num_qpoints() (abipy.electrons.bse.DielectricFunction property) num_spatial_symmetries() (abipy.core.symmetries.AbinitSpaceGroup property) num_steps() (abipy.dynamics.hist.HistFile property) (abipy.dynamics.hist.HistReader method) num_tasks() (abipy.flowtk.flows.Flow property) num_unconverged_tasks() (abipy.flowtk.flows.Flow property) num_valence_electrons() (abipy.abio.inputs.AbinitInput property) (abipy.core.structure.Structure method) number_of_atoms() (abipy.dfpt.ifc.InteratomicForceConstants property) number_of_neighbours() (abipy.dfpt.ifc.InteratomicForceConstants property) nums_and_text() (in module abipy.tools.text) nvols() (abipy.dfpt.gruneisen.GrunsNcFile property) (abipy.dfpt.qha.AbstractQHA property) nw() (abipy.electrons.scr.ScrFile property) nwan_spin() (abipy.wannier90.abiwan.AbiwanFile method) nx() (abipy.core.mesh3d.Mesh3D property) ny() (abipy.core.mesh3d.Mesh3D property) nz() (abipy.core.mesh3d.Mesh3D property)

O

occfacts() (abipy.electrons.ebands.ElectronBands property) occtype (abipy.core.skw.ElectronInterpolator attribute) omega_log() (abipy.eph.a2f.A2f method) omp_threads() (abipy.flowtk.tasks.TaskManager property) on_abisanitize_btn() (abipy.panels.structure.StructurePanel method) on_all_ok() (abipy.flowtk.abiphonopy.PhonopyGruneisenWork method) (abipy.flowtk.abiphonopy.PhonopyWork method) (abipy.flowtk.dfpt_works.ElasticWork method) (abipy.flowtk.effmass_works.EffMassAutoDFPTWork method) (abipy.flowtk.effmass_works.FrohlichZPRFlow method) (abipy.flowtk.flows.Flow method) (abipy.flowtk.gruneisen.GruneisenWork method) (abipy.flowtk.gs_works.EosWork method) (abipy.flowtk.gw.ScreeningWork method) (abipy.flowtk.lumi_works.LumiWork method) (abipy.flowtk.qha.RelaxAndPhononWork method) (abipy.flowtk.works.BecWork method) (abipy.flowtk.works.DteWork method) (abipy.flowtk.works.PhononWfkqWork method) (abipy.flowtk.works.PhononWork method) (abipy.flowtk.works.QptdmWork method) on_border() (abipy.core.kpoints.Kpoint method) on_compare_params_btn() (abipy.panels.core.BaseRobotPanel method) on_corrections_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_debug_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_dep_ok() (abipy.flowtk.flows.Flow method) on_dims_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_ebands_input_btn() (abipy.panels.structure.StructurePanel method) on_ebands_plotter_btn() (abipy.panels.core.PanelWithEbandsRobot method) on_edos_plotter_btn() (abipy.panels.core.PanelWithEbandsRobot method) on_events_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_file_input() (abipy.panels.ddb.CompareDdbWithMP method) (abipy.panels.ddb.DdbPanelWithFileInput method) (abipy.panels.ddb.PanelWithFileInput method) (abipy.panels.outputs.AbinitOutputFilePanelWithFileInput method) (abipy.panels.structure.InputFileGenerator method) on_files_btn() (abipy.panels.tasks.AbinitTaskPanel method) on_graphviz_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_gs_input_btn() (abipy.panels.structure.StructurePanel method) on_gsr_dataframe_btn() (abipy.panels.gsr.GsrRobotPanel method) on_handlers_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_history_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method)

on_load_files() (abipy.panels.ddb.RobotWithFileInput method) on_mp_match_btn() (abipy.panels.structure.StructurePanel method) on_mpid_input() (abipy.panels.ddb.DdbPanelWithFileInput method) (abipy.panels.ddb.PanelWithFileInput method) (abipy.panels.structure.InputFileGenerator method) on_ok() (abipy.flowtk.works.GKKPWork method) (abipy.flowtk.works.PhononWfkqWork method) (abipy.flowtk.works.RelaxWork method) on_ph_input_btn() (abipy.panels.structure.StructurePanel method) on_phbands_plot_btn() (abipy.panels.phonons.PhononBandsPlotterPanel method) on_plot_ebands_btn() (abipy.panels.core.PanelWithElectronBands method) on_plot_edos_btn() (abipy.panels.core.PanelWithElectronBands method) on_plot_fatbands_btn() (abipy.panels.fatbands.FatBandsFilePanel method) on_plot_fatdos_btn() (abipy.panels.fatbands.FatBandsFilePanel method) on_plot_fermi_surface_btn() (abipy.panels.core.PanelWithElectronBands method) on_plot_ifc() (abipy.panels.ddb.DdbFilePanel method) on_plot_phbands_and_phdos() (abipy.panels.ddb.DdbFilePanel method) on_plot_relax_btn() (abipy.panels.hist.HistFilePanel method) on_plot_skw_btn() (abipy.panels.core.PanelWithElectronBands method) on_status_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_structures_btn() (abipy.panels.flows.FlowPanel method) (abipy.panels.tasks.AbinitTaskPanel method) (abipy.panels.works.WorkPanel method) on_task_btn() (abipy.panels.flows.FlowPanel method) on_vars_btn() (abipy.panels.flows.FlowPanel method) on_view_relax_btn() (abipy.panels.hist.HistFilePanel method) on_view_structure() (abipy.panels.core.PanelWithStructure method) only_independent_chi_components() (abipy.abio.inputs.OpticInput method) opath_from_ext() (abipy.flowtk.nodes.FileNode method) (abipy.flowtk.works.Work method) open_browser() (abipy.core.restapi.MpStructures method) (abipy.tools.devtools.HtmlDiff method) open_file_phononwebsite() (in module abipy.dfpt.phtk) open_files() (abipy.flowtk.flows.Flow method) open_gsr() (abipy.flowtk.nodes.FileNode method) open_phbst() (abipy.flowtk.tasks.AnaddbTask method) open_phdos() (abipy.flowtk.tasks.AnaddbTask method) open_sigres() (abipy.flowtk.tasks.SigmaTask method) OpticError OpticInput (class in abipy.abio.inputs) OpticNcFile (class in abipy.electrons.optic) OpticReader (class in abipy.electrons.optic) OpticRobot (class in abipy.electrons.optic) OpticTask (class in abipy.flowtk.tasks) OpticVar (class in abipy.abio.inputs) order() (abipy.core.symmetries.LatticeRotation property) ordered_intersection() (abipy.abio.robots.Robot static method) oscillator_strength() (abipy.dfpt.anaddbnc.AnaddbNcFile method) OutNcFile (class in abipy.abio.outputs) outpath_from_ext() (abipy.flowtk.tasks.AnaddbTask method)

P

pad_fermie (abipy.electrons.ebands.ElectronBands attribute) PanelWithAnaddbParams (class in abipy.panels.ddb) PanelWithEbandsRobot (class in abipy.panels.core) PanelWithElectronBands (class in abipy.panels.core) PanelWithFileInput (class in abipy.panels.ddb) PanelWithStructure (class in abipy.panels.core) PanelWithStructureInput (class in abipy.panels.ddb) paral (abipy.dfpt.raman.PowderIntensity attribute) ParalHints (class in abipy.flowtk.tasks) ParalHintsParser (class in abipy.flowtk.tasks) params() (abipy.abio.outputs.OutNcFile method) (abipy.core.mixins.AbinitNcFile property) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.bse.MdfFile method) (abipy.electrons.eskw.EskwFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.fold2bloch.Fold2BlochNcfile method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.psps.PspsFile method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2fFile method) (abipy.eph.rta.RtaFile method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.transportfile.TransportFile method) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.waves.wfkfile.WfkFile method) parse() (abipy.abio.abivars.AbinitInputParser method) (abipy.flowtk.events.EventsParser method) (abipy.flowtk.tasks.ParalHintsParser method) parse_tdep_fc() (in module abipy.dfpt.converters) parse_tdep_lotosplitting() (in module abipy.dfpt.converters) parse_timers() (abipy.flowtk.works.Work method) parse_timing() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.AbinitTask method) partial (abipy.electrons.lobster.CoxpFile attribute) path() (abipy.flowtk.utils.Directory property) (abipy.flowtk.utils.File property) path_in() (abipy.flowtk.utils.Directory method) path_in_workdir() (abipy.flowtk.works.Work method) path_join() (abipy.flowtk.utils.Directory method) pathname (abipy.flowtk.nodes.HistoryRecord attribute) pawecutdg() (abipy.electrons.gsr.GsrFile method) PbsProJob (class in abipy.flowtk.qjobs) PBSSTAT_TO_SLURM (abipy.flowtk.qjobs.PbsProJob attribute) pconfs() (abipy.flowtk.tasks.AbinitTask property) pdos (abipy.electrons.lobster.LobsterDoscarFile attribute) perp (abipy.dfpt.raman.PowderIntensity attribute) pertsy_qpt() (abipy.eph.v1sym.V1symFile method) ph_ngqpt() (abipy.eph.common.BaseEphReader method) PhaseDiagramResults (class in abipy.core.restapi) phbands() (abipy.core.mixins.Has_PhononBands property) (abipy.dfpt.phonons.PhbstFile property) (abipy.eph.a2f.A2fFile property) phbands_and_dos() (abipy.abio.inputs.AnaddbInput class method) phbands_dict() (abipy.dfpt.phonons.PhononBandsPlotter property) phbands_list() (abipy.dfpt.phonons.PhononBandsPlotter property) phbands_qpath_vol() (abipy.dfpt.gruneisen.GrunsNcFile method) PhbstFile (class in abipy.dfpt.phonons) phdispl_cart_qibz() (abipy.dfpt.gruneisen.GrunsNcFile method) phdos() (abipy.dfpt.gruneisen.GrunsNcFile property) (abipy.dfpt.phonons.PhdosFile method) phdos_label_from_units() (in module abipy.core.abinit_units) phdos_list() (abipy.dfpt.phonons.PhononDosPlotter property) phdoses_dict() (abipy.dfpt.phonons.PhononBandsPlotter property) phdoses_list() (abipy.dfpt.phonons.PhononBandsPlotter property) PhdosFile (class in abipy.dfpt.phonons) PhdosReader (class in abipy.dfpt.phonons) phfactor_ev2units() (abipy.dfpt.phonons.PhononBands static method) (in module abipy.core.abinit_units) phonon (abipy.flowtk.abiphonopy.PhonopyWork attribute) PhononBands (class in abipy.dfpt.phonons) PhononBandsPlotter (class in abipy.dfpt.phonons) PhononBandsPlotterPanel (class in abipy.panels.phonons) PhononDos (class in abipy.dfpt.phonons) PhononDosPlotter (class in abipy.dfpt.phonons) phonons_from_gsinput() (in module abipy.abio.factories) PhononTask (class in abipy.flowtk.tasks) PhononWfkqWork (class in abipy.flowtk.works) PhononWork (class in abipy.flowtk.works) phonopy_tasks (abipy.flowtk.abiphonopy.PhonopyWork attribute) phonopy_to_abinit() (in module abipy.dfpt.converters) PhonopyGruneisenWork (class in abipy.flowtk.abiphonopy) PhonopyWork (class in abipy.flowtk.abiphonopy) phunit_tag() (in module abipy.core.abinit_units) pickle_dump() (abipy.core.mixins.NotebookWriter method) (abipy.core.skw.ElectronInterpolator method) (abipy.electrons.scissors.ScissorsBuilder method) (abipy.eph.sigeph.TdepElectronBands method) (abipy.flowtk.flows.Flow method) pickle_dumps() (abipy.flowtk.flows.Flow method) pickle_file() (abipy.flowtk.flows.Flow property) PICKLE_FNAME (abipy.flowtk.flows.Flow attribute) pickle_load() (abipy.core.mixins.NotebookWriter class method) (abipy.core.skw.ElectronInterpolator class method) (abipy.electrons.scissors.ScissorsBuilder class method) (abipy.eph.sigeph.TdepElectronBands class method) (abipy.flowtk.flows.Flow class method) pickle_loads() (abipy.flowtk.flows.Flow class method) pickle_protocol (abipy.flowtk.flows.Flow attribute) pid() (abipy.flowtk.launcher.PyFlowScheduler property) pid_file() (abipy.flowtk.flows.Flow property) (abipy.flowtk.launcher.PyFlowScheduler property) piezo_elastic() (abipy.abio.inputs.AnaddbInput class method) piezo_elastic_inputs_from_gsinput() (in module abipy.abio.factories) pjdos_symbol() (abipy.dfpt.phonons.PhdosFile method) plot() (abipy.abio.outputs.AbinitLogFile method) (abipy.abio.outputs.AbinitOutputFile method) (abipy.core.func1d.Function1D method) (abipy.core.kpoints.KpointList method) (abipy.core.restapi.PhaseDiagramResults method) (abipy.core.structure.Structure method) (abipy.dfpt.ddb.DielectricTensorGenerator method) (abipy.dfpt.msqdos.MsqDos method) (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDos method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dfpt.vsound.SoundVelocity method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.bse.DielectricFunction method) (abipy.electrons.bse.MdfPlotter method) (abipy.electrons.bse.MultipleMdfPlotter method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDos method) (abipy.electrons.ebands.ElectronDosPlotter method) (abipy.electrons.lobster.CoxpFile method) (abipy.electrons.lobster.ICoxpFile method) (abipy.electrons.lobster.LobsterAnalyzer method) (abipy.electrons.lobster.LobsterDoscarFile method) (abipy.electrons.psps.PspsFile method) (abipy.eph.a2f.A2f method) (abipy.eph.a2f.A2fFile method) (abipy.eph.eph_plotter.EphPlotter method) (abipy.eph.sigeph.EphSelfEnergy method) (abipy.eph.sigeph.QpTempState method) (abipy.eph.sigeph.TdepElectronBands method) (abipy.flowtk.utils.SparseHistogram method) (abipy.tools.fftprof.FFTBenchmark method) (abipy.tools.plotting.ArrayPlotter method) (abipy.tools.plotting.GenericDataFilePlotter method) (abipy.tools.plotting.GenericDataFilesPlotter method) (abipy.wannier90.abiwan.HWanR method) (abipy.wannier90.wout.WoutFile method) plot_a2() (abipy.eph.a2f.A2f method) plot_a2f_convergence() (abipy.eph.a2f.A2fRobot method) plot_a2f_interpol() (abipy.eph.a2f.A2fFile method) plot_a2fdata_convergence() (abipy.eph.a2f.A2fRobot method) plot_a2fw_all() (abipy.eph.sigeph.SigEPhFile method) plot_a2fw_skb() (abipy.eph.sigeph.SigEPhFile method) plot_a2fw_skb_sum() (abipy.eph.sigeph.SigEPhFile method) plot_all() (abipy.dfpt.ddb.DielectricTensorGenerator method) plot_all_segments() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) plot_anharmonic_contribution() (abipy.dfpt.frozen_phonons.FrozenPhonon method) plot_array() (in module abipy.tools.plotting) plot_atoms() (abipy.core.structure.Structure method) plot_average_pairs() (abipy.electrons.lobster.CoxpFile method) plot_ax() (abipy.core.func1d.Function1D method) (abipy.dfpt.phonons.PhononBands method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.bse.DielectricFunction method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronDos method) plot_band_edges() (abipy.electrons.ebands.ElectronBandsPlotter method) plot_bz() (abipy.core.mixins.Has_Structure method) (abipy.core.structure.Structure method) plot_centers_spread() (abipy.wannier90.wout.WoutFile method) plot_chi2() (abipy.electrons.optic.OpticNcFile method) plot_colored_matched() (abipy.dfpt.phonons.PhononBands method) plot_combiplot() (abipy.panels.ddb.DdbRobotPanel method) plot_convergence() (abipy.abio.robots.Robot method) plot_convergence_items() (abipy.abio.robots.Robot method) plot_convergence_rank3() (abipy.electrons.optic.OpticRobot method) plot_coxp_with_dos() (abipy.electrons.lobster.LobsterAnalyzer method) plot_diff_at_qpoint() (abipy.eph.v1sym.V1symFile method) plot_dos_idos() (abipy.dfpt.phonons.PhononDos method) (abipy.electrons.ebands.ElectronDos method) plot_dos_vs_kmeshes() (abipy.core.skw.ElectronInterpolator method) plot_dos_vs_qmesh() (abipy.panels.ddb.DdbFilePanel method) plot_doses() (abipy.dfpt.gruneisen.GrunsNcFile method) plot_e0w_qdirs() (abipy.dfpt.ddb.DielectricTensorGenerator method) plot_ebands() (abipy.core.mixins.Has_ElectronBands method) (abipy.flowtk.works.BandStructureWork method) plot_ebands_with_edos() (abipy.core.mixins.Has_ElectronBands method) (abipy.flowtk.works.BandStructureWork method) plot_edos() (abipy.eph.rta.RtaFile method) (abipy.eph.transportfile.TransportFile method) plot_edoses() (abipy.flowtk.works.BandStructureWork method) plot_eelf() (abipy.electrons.scr.ScrFile method) plot_eigvec_qp() (abipy.electrons.gw.SigresFile method) plot_ejdosvc() (abipy.electrons.ebands.ElectronBands method) plot_elastic_properties() (abipy.dfpt.anaddbnc.AnaddbNcRobot method) plot_emacro() (abipy.electrons.scr.ScrFile method) plot_emass() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) (abipy.electrons.effmass_analyzer.Segment method) plot_energies() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.AbstractQmeshAnalyzer method) (abipy.dynamics.hist.HistFile method) plot_eph_strength() (abipy.eph.a2f.A2fFile method) plot_eps0w() (abipy.panels.ddb.DdbFilePanel method) plot_fatbands() (abipy.dfpt.phonons.PhononBands method) plot_fatbands_lview() (abipy.electrons.fatbands.FatBandsFile method)

plot_fatbands_mview() (abipy.electrons.fatbands.FatBandsFile method) plot_fatbands_siteview() (abipy.electrons.fatbands.FatBandsFile method) plot_fatbands_typeview() (abipy.electrons.fatbands.FatBandsFile method) plot_fatbands_with_pjdos() (abipy.electrons.fatbands.FatBandsFile method) plot_ffspl() (abipy.electrons.psps.PspsFile method) plot_fit() (abipy.electrons.scissors.ScissorsBuilder method) plot_fit_energies() (abipy.dfpt.frozen_phonons.FrozenPhonon method) plot_fit_freqs_dir() (abipy.dfpt.vsound.SoundVelocity method) plot_gruns_bs() (abipy.dfpt.gruneisen.GrunsNcFile method) plot_gruns_scatter() (abipy.dfpt.gruneisen.GrunsNcFile method) plot_harmonic_thermo() (abipy.dfpt.phonons.PhononDos method) (abipy.dfpt.phonons.PhononDosPlotter method) plot_hwanr() (abipy.wannier90.abiwan.AbiwanRobot method) plot_ibte_mrta_serta_conv() (abipy.eph.rta.RtaRobot method) plot_ibte_vs_rta_rho() (abipy.eph.rta.RtaFile method) (abipy.eph.rta.RtaRobot method) plot_ifc_yscale (abipy.panels.ddb.PanelWithAnaddbParams attribute) plot_intensity() (abipy.dfpt.raman.Raman method) plot_ion_relaxation() (abipy.flowtk.works.RelaxWork method) plot_ioncell_relaxation() (abipy.flowtk.works.RelaxWork method) plot_itemp() (abipy.eph.sigeph.TdepElectronBands method) plot_itemp_with_lws_vs_e0() (abipy.eph.sigeph.TdepElectronBands method) plot_ksbands_with_qpmarkers() (abipy.electrons.gw.SigresFile method) plot_labels() (in module abipy.display.mvtk) plot_lambda_convergence() (abipy.eph.a2f.A2fRobot method) plot_lattice_convergence() (abipy.abio.robots.Robot method) plot_lattice_vectors() (in module abipy.display.mvtk) plot_leo() (abipy.electrons.optic.OpticNcFile method) plot_leo_convergence() (abipy.electrons.optic.OpticRobot method) plot_line() (abipy.waves.pwwave.PWWaveFunction method) plot_line_neighbors() (abipy.waves.pwwave.PWWaveFunction method) plot_linear_epsilon() (abipy.electrons.optic.OpticNcFile method) plot_linewidths_sigeph() (abipy.eph.eph_plotter.EphPlotter method) plot_linopt() (abipy.electrons.optic.OpticNcFile method) plot_linopt_convergence() (abipy.electrons.optic.OpticRobot method) plot_longitudinal_fatbands() (abipy.dfpt.phonons.PhononBands method) plot_longitudinal_fraction() (abipy.dfpt.phonons.PhononBands method) plot_longitudinal_ifc() (abipy.dfpt.ifc.InteratomicForceConstants method) plot_longitudinal_ifc_ewald() (abipy.dfpt.ifc.InteratomicForceConstants method) plot_longitudinal_ifc_short_range() (abipy.dfpt.ifc.InteratomicForceConstants method) plot_lt_character() (abipy.dfpt.phonons.PhononBands method) plot_lws_vs_e0() (abipy.electrons.ebands.ElectronBands method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) (abipy.eph.sigeph.TdepElectronBands method) plot_maxw() (abipy.eph.wr.WrNcFile method) plot_mayaview() (abipy.core.structure.Structure method) plot_mdfs() (abipy.electrons.bse.MdfFile method) plot_mdftype_cplx() (abipy.electrons.bse.MultipleMdfPlotter method) plot_mobility() (abipy.eph.rta.RtaFile method) (abipy.eph.transportfile.TransportFile method) plot_mobility_kconv() (abipy.eph.rta.RtaRobot method) plot_networkx() (abipy.flowtk.flows.Flow method) plot_nuterms() (abipy.eph.a2f.A2f method) plot_pawdos_terms() (abipy.electrons.fatbands.FatBandsFile method) plot_pdos_site() (abipy.electrons.lobster.LobsterDoscarFile method) plot_phbands() (abipy.core.mixins.Has_PhononBands method) plot_phbands_quad() (abipy.panels.ddb.DdbFilePanel method) plot_phbands_with_gruns() (abipy.dfpt.gruneisen.GrunsNcFile method) plot_phbs() (abipy.dfpt.qha.AbstractQHA method) plot_phdispl() (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononBandsPlotter method) plot_phdispl_cartdirs() (abipy.dfpt.phonons.PhononBands method) plot_phonons_occ() (abipy.eph.eph_plotter.EphPlotter method) plot_pjdos_cartdirs_site() (abipy.dfpt.phonons.PhdosFile method) plot_pjdos_cartdirs_type() (abipy.dfpt.phonons.PhdosFile method) plot_pjdos_lview() (abipy.electrons.fatbands.FatBandsFile method) plot_pjdos_type() (abipy.dfpt.phonons.PhdosFile method) plot_pjdos_typeview() (abipy.electrons.fatbands.FatBandsFile method) plot_pots_at_qpoint() (abipy.eph.v1sym.V1symFile method) plot_qpbands() (abipy.electrons.scissors.ScissorsBuilder method) plot_qpbands_ibz() (abipy.electrons.gw.SigresFile method) plot_qpbands_ibzt() (abipy.eph.sigeph.SigEPhFile method) plot_qpdata_conv_skb() (abipy.electrons.gw.SigresRobot method) (abipy.eph.sigeph.SigEPhRobot method) plot_qpdata_t() (abipy.eph.sigeph.SigEPhFile method) plot_qpe_vs_e0() (abipy.electrons.scissors.ScissorsBuilder method) plot_qpfield_vs_e0() (abipy.electrons.gw.SigresRobot method) (abipy.eph.sigeph.SigEPhRobot method) plot_qpgaps() (abipy.electrons.gw.SigresFile method) plot_qpgaps_convergence() (abipy.electrons.gw.SigresRobot method) (abipy.eph.sigeph.SigEPhRobot method) plot_qpgaps_t() (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) plot_qps_vs_e0() (abipy.electrons.gw.SigresFile method) (abipy.eph.sigeph.SigEPhFile method) plot_qpsolution() (abipy.eph.sigeph.EphSelfEnergy method) plot_qpsolution_sk() (abipy.eph.sigeph.SigEPhFile method) plot_qpsolution_skb() (abipy.eph.sigeph.SigEPhFile method) plot_qpsolution_sklineb() (abipy.eph.sigeph.SigEPhFile method) plot_qpt_distance() (abipy.dfpt.phonons.PhononBands method) plot_reflectivity() (abipy.dfpt.ddb.DielectricTensorGenerator method) plot_scatter3d() (abipy.electrons.ebands.ElectronBands method) plot_selfenergy_conv() (abipy.electrons.gw.SigresRobot method) (abipy.eph.sigeph.SigEPhRobot method) plot_shg() (abipy.electrons.optic.OpticNcFile method) plot_shg_convergence() (abipy.electrons.optic.OpticRobot method) plot_site_pairs_partial() (abipy.electrons.lobster.CoxpFile method) plot_site_pairs_total() (abipy.electrons.lobster.CoxpFile method) plot_spectral_functions() (abipy.electrons.gw.SigresFile method) plot_spilling() (abipy.electrons.fatbands.FatBandsFile method) plot_structure() (in module abipy.display.mvtk) plot_tau_isoe() (abipy.eph.rta.RtaFile method) plot_tau_vtau() (abipy.eph.sigeph.SigEPhFile method) plot_tc_vs_mustar() (abipy.eph.a2f.A2f method) plot_tcore_qspace() (abipy.electrons.psps.PspsFile method) plot_tcore_rspace() (abipy.electrons.psps.PspsFile method) plot_tdep() (abipy.eph.sigeph.EphSelfEnergy method) plot_tensor() (abipy.dfpt.msqdos.MsqDos method) plot_thermal_expansion_coeff() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.AbstractQmeshAnalyzer method) plot_transitions() (abipy.electrons.ebands.ElectronBands method) plot_transport_tensors_mu() (abipy.eph.rta.RtaFile method) plot_uiso() (abipy.dfpt.msqdos.MsqDos method) plot_unfolded() (abipy.electrons.fold2bloch.Fold2BlochNcfile method) plot_unit_cell() (in module abipy.display.mvtk) (in module abipy.tools.plotting) plot_up_minus_down() (abipy.electrons.ebands.ElectronDos method) plot_vlocq() (abipy.electrons.psps.PspsFile method) plot_vol_vs_t() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.AbstractQmeshAnalyzer method) plot_vs_e0() (abipy.eph.sigeph.QpTempList method) plot_vs_w() (abipy.dfpt.ddb.DielectricTensorGenerator method) plot_vsound() (abipy.panels.ddb.DdbFilePanel method) plot_vtk() (abipy.core.structure.Structure method) plot_vvtau_dos() (abipy.eph.rta.RtaFile method) (abipy.eph.transportfile.TransportFile method) plot_wigner_seitz() (in module abipy.display.mvtk) plot_with_a2f() (abipy.eph.a2f.A2fFile method) plot_with_edos() (abipy.electrons.ebands.ElectronBands method) plot_with_lambda() (abipy.eph.a2f.A2f method) plot_with_phdos() (abipy.dfpt.phonons.PhononBands method) plot_without_asr_dipdip() (abipy.panels.ddb.DdbFilePanel method) (abipy.panels.ddb.DdbRobotPanel method) plot_xrd() (abipy.core.structure.Structure method) plot_xy_with_hue() (abipy.abio.robots.Robot static method) plotly() (abipy.core.kpoints.KpointList method) (abipy.core.structure.Structure method) (abipy.dfpt.ddb.DielectricTensorGenerator method) (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononDos method) (abipy.dfpt.vsound.SoundVelocity method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronDos method) plotly_bz() (abipy.core.structure.Structure method) plotly_dos_idos() (abipy.dfpt.phonons.PhononDos method) (abipy.electrons.ebands.ElectronDos method) plotly_expose() (abipy.core.mixins.NotebookWriter method) plotly_fatbands() (abipy.dfpt.phonons.PhononBands method) plotly_fatbands_lview() (abipy.electrons.fatbands.FatBandsFile method) plotly_fatbands_typeview() (abipy.electrons.fatbands.FatBandsFile method) plotly_fatbands_with_pjdos() (abipy.electrons.fatbands.FatBandsFile method) plotly_fit_freqs_dir() (abipy.dfpt.vsound.SoundVelocity method) plotly_harmonic_thermo() (abipy.dfpt.phonons.PhononDos method) plotly_pjdos_lview() (abipy.electrons.fatbands.FatBandsFile method) plotly_pjdos_type() (abipy.dfpt.phonons.PhdosFile method) plotly_pjdos_typeview() (abipy.electrons.fatbands.FatBandsFile method) plotly_traces() (abipy.core.func1d.Function1D method) (abipy.dfpt.phonons.PhononBands method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronDos method) plotly_up_minus_down() (abipy.electrons.ebands.ElectronDos method) plotly_with_edos() (abipy.electrons.ebands.ElectronBands method) plotly_with_phdos() (abipy.dfpt.phonons.PhononBands method) ply() (in module abipy.panels.core) Polarizability (class in abipy.electrons.scr) pop_irdvars() (abipy.abio.inputs.AbinitInput method) pop_label() (abipy.abio.robots.Robot method) pop_par_vars() (abipy.abio.inputs.AbinitInput method) pop_tolerances() (abipy.abio.inputs.AbinitInput method) pop_vars() (abipy.abio.inputs.AbstractInput method) pos() (abipy.flowtk.works.Work method) pos_str() (abipy.flowtk.works.Work property) posneg_marker() (abipy.tools.plotting.Marker method) postpone_on_all_ok() (abipy.flowtk.works.Work method) PotNcFile (class in abipy.electrons.denpot) PowderIntensity (class in abipy.dfpt.raman) pressure() (abipy.electrons.gsr.GsrFile method) print_bz2ibz() (abipy.core.kpoints.Ktables method) print_dataframes() (abipy.core.restapi.PhaseDiagramResults method) print_doc() (in module abipy.tools.notebooks) print_neighbors() (abipy.core.structure.Structure method) print_qps() (abipy.electrons.gw.SigresFile method) print_results() (abipy.core.restapi.DatabaseStructures method) print_source() (in module abipy.tools.notebooks) print_source_in_module() (in module abipy.tools.notebooks) processes() (abipy.flowtk.works.Work property) Product (class in abipy.flowtk.nodes) product() (abipy.abio.inputs.AbinitInput method) product_dict() (in module abipy.abio.inputs) products() (abipy.flowtk.nodes.Dependency method) (abipy.flowtk.nodes.FileNode property) profile() (in module abipy.tools.devtools) prune_ord() (in module abipy.tools.numtools) pseudo() (in module abipy.data) pseudos() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.MultiDataset property) (abipy.flowtk.tasks.AbinitTask property) (in module abipy.data) PspsFile (class in abipy.electrons.psps) PspsReader (class in abipy.electrons.psps) push_exceptions() (abipy.flowtk.nodes.NodeResults method) pws() (abipy.panels.core.AbipyParameterized method) pws_col() (abipy.panels.core.AbipyParameterized method) PWWaveFunction (class in abipy.waves.pwwave) pyfile() (abipy.flowtk.flows.Flow property) PyFlowScheduler (class in abipy.flowtk.launcher) pygmentize() (abipy.tools.devtools.HtmlDiff method) PyLauncher (class in abipy.flowtk.launcher)

Q

qadapter() (abipy.flowtk.tasks.TaskManager property) qads() (abipy.flowtk.tasks.TaskManager property) qfrac_coords() (abipy.electrons.bse.DielectricFunction property) (abipy.electrons.bse.MdfFile property) QHA (class in abipy.dfpt.qha) QHA3P (class in abipy.dfpt.qha) QHA3PF (class in abipy.dfpt.qha) QhaFlow (class in abipy.flowtk.qha) QHAQmeshAnalyzer (class in abipy.dfpt.qha) qibz() (abipy.dfpt.gruneisen.GrunsNcFile method) qindex() (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhononBands method) qindex_qpoint() (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhononBands method) qp_dirgaps_otms_t() (abipy.eph.sigeph.SigEPhFile method) qp_dirgaps_t() (abipy.eph.sigeph.SigEPhFile method) qpeme0() (abipy.electrons.gw.QPState property) (abipy.eph.sigeph.QpTempState method) qpgaps() (abipy.electrons.gw.SigresFile method) qplist_spin() (abipy.electrons.gw.SigresFile method) (abipy.eph.sigeph.SigEPhFile method)

qpoints() (abipy.dfpt.ddb.DdbFile property) (abipy.dfpt.phonons.PhbstFile property) (abipy.electrons.bse.MdfFile property) (abipy.electrons.bse.MdfReader method) (abipy.eph.v1sym.V1symFile method) QPState (class in abipy.electrons.gw) qpt_cart_coords() (abipy.dfpt.frozen_phonons.FrozenPhonon property) QptdmWork (class in abipy.flowtk.works) QpTempList (class in abipy.eph.sigeph) QpTempState (class in abipy.eph.sigeph) QTYPE (abipy.flowtk.qjobs.BlueGeneJob attribute) (abipy.flowtk.qjobs.MoabJob attribute) (abipy.flowtk.qjobs.PbsProJob attribute) (abipy.flowtk.qjobs.QueueJob attribute) (abipy.flowtk.qjobs.SgeJob attribute) (abipy.flowtk.qjobs.ShellJob attribute) (abipy.flowtk.qjobs.SlurmJob attribute) (abipy.flowtk.qjobs.TorqueJob attribute) quadratic_fit_function() (in module abipy.dfpt.frozen_phonons) QueueJob (class in abipy.flowtk.qjobs)

R

Raman (class in abipy.dfpt.raman) random() (abipy.core.mesh3d.Mesh3D method) rapidfire() (abipy.flowtk.flows.Flow method) (abipy.flowtk.launcher.PyLauncher method) rc_list() (in module abipy.core.kpoints) re_fan0() (abipy.eph.sigeph.QpTempState property) re_qpe() (abipy.electrons.gw.QPState property) (abipy.eph.sigeph.QpTempState method) re_sig0() (abipy.eph.sigeph.QpTempState method) read() (abipy.flowtk.utils.File method) read_a2f() (abipy.eph.a2f.A2fReader method) read_a2feph_skb() (abipy.eph.sigeph.SigmaPhReader method) read_all_structures() (abipy.dynamics.hist.HistReader method) read_allqps() (abipy.eph.sigeph.SigmaPhReader method) read_amu_symbol() (abipy.iotools.ETSF_Reader method) read_amuz_dict() (abipy.dfpt.gruneisen.GrunsReader method) read_cart_forces() (abipy.dynamics.hist.HistReader method) read_cart_stress_tensors() (abipy.dynamics.hist.HistReader method) read_coresd() (abipy.electrons.psps.PspsReader method) read_doses() (abipy.dfpt.gruneisen.GrunsReader method) read_edos() (abipy.eph.a2f.A2fReader method) read_eelf() (abipy.electrons.scr.ScrReader method) read_emacro_lf() (abipy.electrons.scr.ScrReader method) read_emacro_nlf() (abipy.electrons.scr.ScrReader method) read_eterms() (abipy.dynamics.hist.HistReader method) read_etotals() (abipy.flowtk.works.Work method) read_exc_mdf() (abipy.electrons.bse.MdfReader method) read_gwnlf_mdf() (abipy.electrons.bse.MdfReader method) read_lineps() (abipy.electrons.optic.OpticReader method) read_msq_dos() (abipy.dfpt.phonons.PhdosReader method) read_ngfft3() (abipy.iotools.ETSF_Reader method) read_non_anal_from_file() (abipy.dfpt.phonons.PhononBands method) read_params() (abipy.electrons.bse.MdfReader method) (abipy.electrons.scr.ScrReader method) read_phbands_on_qpath() (abipy.dfpt.gruneisen.GrunsReader method) read_phbands_qpath() (abipy.eph.a2f.A2fReader method) read_phdos() (abipy.dfpt.phonons.PhdosReader method) read_phgamma_qpath() (abipy.eph.a2f.A2fReader method) read_phlambda_qpath() (abipy.eph.a2f.A2fReader method) read_pjdos_atdir() (abipy.dfpt.phonons.PhdosReader method) read_pjdos_symbol_dict() (abipy.dfpt.phonons.PhdosReader method) read_pjdos_symbol_xyz_dict() (abipy.dfpt.phonons.PhdosReader method) read_pjdos_type() (abipy.dfpt.phonons.PhdosReader method) read_projectors() (abipy.electrons.psps.PspsReader method) read_qp() (abipy.eph.sigeph.SigmaPhReader method) read_qplist_sk() (abipy.eph.sigeph.SigmaPhReader method) read_reduced_forces() (abipy.dynamics.hist.HistReader method) read_rpanlf_mdf() (abipy.electrons.bse.MdfReader method) read_sigee_skb() (abipy.electrons.gw.SigresFile method) read_sigeph_skb() (abipy.eph.sigeph.SigmaPhReader method) read_string() (abipy.iotools.ETSF_Reader method) read_structure() (abipy.iotools.ETSF_Reader method) read_structures() (abipy.dfpt.gruneisen.GrunsReader method) read_tcorespl() (abipy.electrons.psps.PspsReader method) read_tensor3_terms() (abipy.electrons.optic.OpticReader method) read_v1_at_iq() (abipy.eph.v1sym.V1symFile method) read_vlspl() (abipy.electrons.psps.PspsReader method) read_wggmat() (abipy.electrons.scr.ScrReader method) read_wslice() (abipy.electrons.scr.ScrReader method) readlines() (abipy.flowtk.utils.File method) real() (abipy.core.func1d.Function1D property) received_signal() (abipy.flowtk.qjobs.QueueJob method) reciprocal_lattice() (abipy.core.kpoints.KpointList property) (abipy.core.structure.Structure property) (abipy.electrons.ebands.ElectronBands property) reduce_dilatmx() (abipy.flowtk.tasks.RelaxTask method) ref_file() (in module abipy.data) ref_files() (in module abipy.data) refine() (abipy.core.structure.Structure method)

reflectivity() (abipy.dfpt.ddb.DielectricTensorGenerator method) (abipy.tools.tensors.DielectricTensor method) (in module abipy.electrons.optic) register() (abipy.flowtk.works.Work method) register_decorator() (abipy.abio.inputs.AbinitInput method) register_gridfs_files() (abipy.flowtk.nodes.NodeResults method) register_task() (abipy.flowtk.flows.Flow method) (abipy.flowtk.works.Work method) register_work() (abipy.flowtk.flows.Flow method) register_work_from_cbk() (abipy.flowtk.flows.Flow method) RelaxAndPhononWork (class in abipy.flowtk.qha) RelaxConvergenceWarning (class in abipy.flowtk.events) RelaxTask (class in abipy.flowtk.tasks) RelaxWork (class in abipy.flowtk.works) reload() (abipy.flowtk.flows.Flow method) relpath() (abipy.flowtk.utils.Directory property) (abipy.flowtk.utils.File property) relworkdir() (abipy.flowtk.nodes.Node property) remap_labels() (abipy.abio.robots.Robot method) remove() (abipy.abio.robots.Robot method) (abipy.flowtk.utils.File method) remove_block() (abipy.dfpt.ddb.DdbFile method) remove_deps() (abipy.flowtk.nodes.Node method) remove_duplicated() (abipy.core.kpoints.KpointList method) remove_exts() (abipy.flowtk.utils.Directory method) remove_tags() (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.MultiDataset method) remove_vars() (abipy.abio.inputs.AbstractInput method) rename_abiext() (abipy.flowtk.utils.Directory method) replace_block_for_qpoint() (abipy.dfpt.ddb.DdbFile method) replicate() (abipy.abio.inputs.AbinitInput method) replicate_input() (abipy.abio.inputs.MultiDataset class method) report_exception() (abipy.flowtk.events.EventsParser method) repr_html_from_abinit_string() (in module abipy.abio.abivars_db) rescale() (in module abipy.electrons.psps) reset() (abipy.flowtk.launcher.ScriptEditor method) reset_from_scratch() (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.OpticTask method) reshape() (abipy.core.mesh3d.Mesh3D method) residm() (abipy.electrons.gsr.GsrFile method) restart() (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.NscfTask method) (abipy.flowtk.tasks.RelaxTask method) (abipy.flowtk.tasks.ScfTask method) (abipy.flowtk.tasks.SigmaTask method) Results (abipy.flowtk.flows.Flow attribute) (abipy.flowtk.nodes.Node attribute) (abipy.flowtk.tasks.AbinitTask attribute) return_straceback_ifexc() (in module abipy.tools.decorators) rm_and_build() (abipy.flowtk.flows.Flow method) rm_indatadir() (abipy.flowtk.works.Work method) rm_outdatadir() (abipy.flowtk.works.Work method) rm_tmpdatadir() (abipy.flowtk.works.Work method) rmtree() (abipy.flowtk.flows.Flow method) (abipy.flowtk.utils.Directory method) (abipy.flowtk.works.Work method) Robot (class in abipy.abio.robots) RobotWithFileInput (class in abipy.panels.ddb) rocksalt() (abipy.core.structure.Structure class method) root_inv() (abipy.core.symmetries.LatticeRotation property) rpanlf_mdf() (abipy.electrons.bse.MdfFile method) rpoint() (abipy.core.mesh3d.Mesh3D method) rpoints() (abipy.core.mesh3d.Mesh3D method) rreplace() (in module abipy.tools.text) RtaFile (class in abipy.eph.rta) RtaRobot (class in abipy.eph.rta) run_in_shell() (abipy.abio.inputs.AbinitInput method) run_nbpath() (abipy.core.testing.AbipyTest method) run_qlist() (abipy.dfpt.qha.QHAQmeshAnalyzer method) runlevel() (abipy.abio.inputs.AbinitInput property)

S

s2itup() (in module abipy.core.abinit_units) S_ABICRITICAL (abipy.flowtk.nodes.Node attribute) S_CANCELLED (abipy.flowtk.qjobs.QueueJob attribute) S_COMPLETED (abipy.flowtk.qjobs.QueueJob attribute) S_DONE (abipy.flowtk.nodes.Node attribute) S_ERROR (abipy.flowtk.nodes.Node attribute) S_FAILED (abipy.flowtk.qjobs.QueueJob attribute) S_INIT (abipy.flowtk.nodes.Node attribute) S_LOCKED (abipy.flowtk.nodes.Node attribute) S_NODEFAIL (abipy.flowtk.qjobs.QueueJob attribute) S_OK (abipy.flowtk.nodes.Node attribute) S_PENDING (abipy.flowtk.qjobs.QueueJob attribute) S_PREEMPTED (abipy.flowtk.qjobs.QueueJob attribute) S_QCRITICAL (abipy.flowtk.nodes.Node attribute) S_READY (abipy.flowtk.nodes.Node attribute) S_RESIZING (abipy.flowtk.qjobs.QueueJob attribute) S_RUN (abipy.flowtk.nodes.Node attribute) S_RUNNING (abipy.flowtk.qjobs.QueueJob attribute) S_SUB (abipy.flowtk.nodes.Node attribute) S_SUSPENDED (abipy.flowtk.qjobs.QueueJob attribute) S_TIMEOUT (abipy.flowtk.qjobs.QueueJob attribute) S_UNCONVERGED (abipy.flowtk.nodes.Node attribute) S_UNKNOWN (abipy.flowtk.qjobs.QueueJob attribute) saturation_slider() (in module abipy.display.utils) save_lastnode_id() (in module abipy.flowtk.nodes) scale_lattice() (abipy.core.structure.Structure method) scan_dir() (abipy.abio.robots.Robot method) scdims (abipy.flowtk.abiphonopy.PhonopyGruneisenWork attribute) (abipy.flowtk.abiphonopy.PhonopyWork attribute) scf_for_phonons() (in module abipy.abio.factories) scf_phonons_inputs() (in module abipy.abio.factories) scf_piezo_elastic_inputs() (in module abipy.abio.factories) scf_tolvar() (abipy.abio.inputs.AbinitInput property) ScfConvergenceWarning (class in abipy.flowtk.events) ScfTask (class in abipy.flowtk.tasks) Scissors (class in abipy.electrons.scissors) scissors_spin() (abipy.electrons.scissors.ScissorsBuilder property) ScissorsBuilder (class in abipy.electrons.scissors) ScreeningWork (class in abipy.flowtk.gw) ScrFile (class in abipy.electrons.scr) ScriptEditor (class in abipy.flowtk.launcher) ScrReader (class in abipy.electrons.scr) Segment (class in abipy.electrons.effmass_analyzer) select_band_edges() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) select_cbm() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) select_files() (abipy.flowtk.tasks.AbinitTask method) select_kpoint_band() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) select_qadapter() (abipy.flowtk.tasks.TaskManager method) select_tasks() (abipy.flowtk.flows.Flow method) select_vbm() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) select_with_condition() (abipy.flowtk.tasks.ParalHints method) send_email() (abipy.flowtk.launcher.PyFlowScheduler method) send_signal() (abipy.flowtk.nodes.Node method) set_2nd_ord_data() (abipy.dfpt.ddb.DdbFile method) set_abi_spacegroup() (abipy.core.structure.Structure method) set_abinit_template() (in module abipy.panels.core) set_abipy_meta_json() (abipy.flowtk.nodes.Node method) set_autokmesh() (abipy.abio.inputs.AbinitInput method) set_autoqmesh() (abipy.abio.inputs.AnaddbInput method) set_autospinat() (abipy.abio.inputs.AbinitInput method) set_axlims() (in module abipy.tools.plotting) set_basis_functions_from_abinit_pseudos() (abipy.electrons.lobster.LobsterInput method) set_basis_functions_from_potcar() (abipy.electrons.lobster.LobsterInput method) set_comment() (abipy.abio.inputs.AbinitInput method) set_eos() (abipy.dfpt.qha.AbstractQHA method) (abipy.dfpt.qha.AbstractQmeshAnalyzer method) set_fermie() (abipy.electrons.ebands.ElectronBands method) set_fermie_from_edos() (abipy.electrons.ebands.ElectronBands method) set_fermie_to_vbm (abipy.panels.core.PanelWithElectronBands attribute) set_fermie_to_vbm() (abipy.electrons.ebands.ElectronBands method) set_flow() (abipy.flowtk.works.Work method) set_gamma_sampling() (abipy.abio.inputs.AbinitInput method) set_garbage_collector() (abipy.flowtk.flows.Flow method) set_gc() (abipy.flowtk.nodes.Node method) set_kmesh() (abipy.abio.inputs.AbinitInput method) set_kmesh_nband_and_occ() (abipy.abio.inputs.AbinitInput method) set_kpath() (abipy.abio.inputs.AbinitInput method) (abipy.wannier90.win.Wannier90Input method) set_kptgw() (abipy.abio.inputs.AbinitInput method) set_manager() (abipy.flowtk.works.Work method) set_mem_per_proc() (abipy.flowtk.tasks.TaskManager method) set_mnemonics() (abipy.abio.inputs.AbinitInput method) set_mpi_procs() (abipy.flowtk.tasks.TaskManager method) set_name() (abipy.core.kpoints.Kpoint method) (abipy.flowtk.nodes.Node method) set_node_id() (abipy.flowtk.nodes.Node method) set_omp_threads() (abipy.flowtk.tasks.TaskManager method) set_pconfs() (abipy.flowtk.tasks.AbinitTask method) set_phdos_qmesh() (abipy.abio.inputs.AbinitInput method) set_phonopy_obj_from_ananc() (abipy.dfpt.phonons.PhononBands method) set_pyfile() (abipy.flowtk.flows.Flow method) set_qpath() (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.AnaddbInput method) set_readme() (abipy.flowtk.nodes.Node method) set_spectator_mode() (abipy.flowtk.flows.Flow method) set_spell_check() (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.AnaddbInput method) (abipy.wannier90.win.Wannier90Input method) set_spin_mode() (abipy.abio.inputs.AbinitInput method) set_spinat_from_symbols() (abipy.abio.inputs.AbinitInput method) set_status_exitcode_signal() (abipy.flowtk.qjobs.QueueJob method) set_structure() (abipy.abio.inputs.AbinitInput method) set_usepawu() (abipy.abio.inputs.AbinitInput method) set_user_config_taskmanager() (in module abipy.flowtk.tasks) set_vars() (abipy.abio.inputs.AbstractInput method) (abipy.flowtk.tasks.OpticTask method) set_vars_ifnotin() (abipy.abio.inputs.AbstractInput method) set_weight() (abipy.core.kpoints.Kpoint method) set_workdir() (abipy.flowtk.flows.Flow method) (abipy.flowtk.tasks.OpticTask method) (abipy.flowtk.works.Work method) setup() (abipy.flowtk.tasks.AbinitTask method) (abipy.flowtk.tasks.AnaddbTask method) (abipy.flowtk.tasks.NscfTask method) (abipy.flowtk.tasks.OpticTask method) (abipy.flowtk.works.Work method) SgeJob (class in abipy.flowtk.qjobs) shape() (abipy.dfpt.phonons.PhononBands property) (abipy.electrons.ebands.ElectronBands property) shebang() (abipy.flowtk.launcher.ScriptEditor method) shell() (abipy.flowtk.launcher.ScriptEditor property) ShellJob (class in abipy.flowtk.qjobs) show_abierrors() (abipy.flowtk.flows.Flow method) show_bz() (abipy.core.mixins.Has_Structure method) show_corrections() (abipy.flowtk.flows.Flow method) show_dependencies() (abipy.flowtk.flows.Flow method) show_event_handlers() (abipy.flowtk.nodes.Node method) show_events() (abipy.flowtk.flows.Flow method) show_exception() (in module abipy.panels.core) show_files() (abipy.abio.robots.Robot method) show_history() (abipy.flowtk.flows.Flow method) show_info() (abipy.flowtk.flows.Flow method) show_inputs() (abipy.flowtk.flows.Flow method) show_qouts() (abipy.flowtk.flows.Flow method) show_receivers() (abipy.flowtk.flows.Flow method) show_status() (abipy.flowtk.flows.Flow method) show_summary() (abipy.flowtk.flows.Flow method) show_tricky_tasks() (abipy.flowtk.flows.Flow method) shutdown() (abipy.flowtk.launcher.PyFlowScheduler method) SigEPhFile (class in abipy.eph.sigeph) SigEPhRobot (class in abipy.eph.sigeph) sigkpt2index() (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigmaPhReader method) sigma_kpoints() (abipy.electrons.gw.SigresFile property) (abipy.eph.sigeph.SigEPhFile property) SigmaConvWork (class in abipy.flowtk.works) SigmaPhReader (class in abipy.eph.sigeph) SigmaTask (class in abipy.flowtk.tasks) sign_sqrtekb() (abipy.electrons.psps.VnlProjector property) sigres_path() (abipy.flowtk.tasks.SigmaTask property)

SigresFile (class in abipy.electrons.gw) SigresRobot (class in abipy.electrons.gw) single_shot() (abipy.flowtk.flows.Flow method) (abipy.flowtk.launcher.PyLauncher method) site_pairs_partial() (abipy.electrons.lobster.CoxpFile property) site_pairs_total() (abipy.electrons.lobster.CoxpFile property) site_symmetries() (abipy.core.structure.Structure method) SiteSymmetries (class in abipy.core.site_symmetries) size_slider() (in module abipy.display.utils) skb() (abipy.electrons.gw.QPState property) (abipy.eph.sigeph.QpTempState method) skb_iter() (abipy.electrons.ebands.ElectronBands method) skip_if_abinit_not_ge() (abipy.core.testing.AbipyTest method) skip_if_not_bolztrap2() (abipy.core.testing.AbipyTest static method) skip_if_not_executable() (abipy.core.testing.AbipyTest method) skip_if_not_phonopy() (abipy.core.testing.AbipyTest static method) skip_if_not_pseudodojo() (abipy.core.testing.AbipyTest static method) skw_line_density (abipy.panels.core.PanelWithElectronBands attribute) skw_lpratio (abipy.panels.core.PanelWithElectronBands attribute) SkwInterpolator (class in abipy.core.skw) slurm_parse_timestr() (in module abipy.flowtk.qutils) SlurmJob (class in abipy.flowtk.qjobs) SmearingDecorator (class in abipy.abio.decorators) smooth() (in module abipy.tools.numtools) software_stack() (in module abipy.abilab) sort_and_groupby() (in module abipy.tools.numtools) sort_by_e0() (abipy.eph.sigeph.QpTempList method) sort_by_efficiency() (abipy.flowtk.tasks.ParalHints method) sort_by_mem_per_proc() (abipy.flowtk.tasks.ParalHints method) sort_by_speedup() (abipy.flowtk.tasks.ParalHints method) sortby() (abipy.abio.robots.Robot method) sortby_label() (abipy.abio.robots.Robot static method) SoundVelocity (class in abipy.dfpt.vsound) spacing() (abipy.electrons.ebands.ElectronBands method) SparseHistogram (class in abipy.flowtk.utils) species_by_znucl() (abipy.core.structure.Structure property) SpectatorError (abipy.flowtk.nodes.Node attribute) SpectatorNodeError spell_check() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.AnaddbInput property) (abipy.wannier90.win.Wannier90Input property) spget_equivalent_atoms() (abipy.core.structure.Structure method) spget_lattice_type() (abipy.core.structure.Structure method) spget_site_symmetries() (abipy.core.structure.Structure method) spget_summary() (abipy.core.structure.Structure method) spglib_summary() (abipy.panels.structure.StructurePanel method) spgset_abi_spacegroup() (abipy.core.structure.Structure method) spin2tex (abipy.electrons.fatbands.FatBandsFile attribute) SpinDecorator (class in abipy.abio.decorators) spinors2color (abipy.electrons.fatbands.FatBandsFile attribute) spinors2tex (abipy.electrons.fatbands.FatBandsFile attribute) spins() (abipy.electrons.ebands.ElectronBands property) spline() (abipy.core.func1d.Function1D method) spline_derivatives() (abipy.core.func1d.Function1D method) spline_int_jlqr() (in module abipy.tools.bessel) spline_integral() (abipy.core.func1d.Function1D method) spline_on_mesh() (abipy.core.func1d.Function1D method) spline_roots() (abipy.core.func1d.Function1D property) split_datasets() (abipy.abio.inputs.MultiDataset method) split_dwdq() (abipy.dfpt.gruneisen.GrunsNcFile method) split_gruns() (abipy.dfpt.gruneisen.GrunsNcFile method) split_gruns_finite_differences() (abipy.dfpt.gruneisen.GrunsNcFile method) split_matched_indices() (abipy.dfpt.phonons.PhononBands property) split_phdispl_cart() (abipy.dfpt.phonons.PhononBands property) split_phfreqs() (abipy.dfpt.phonons.PhononBands property) split_qpoints() (abipy.dfpt.phonons.PhononBands property) start (abipy.abio.robots.Robot attribute) start() (abipy.flowtk.launcher.PyFlowScheduler method) (abipy.flowtk.mocks.AbinitTaskMockedStart method) (abipy.flowtk.works.Work method) statdiff() (abipy.electrons.ebands.ElectronBands method) Status (class in abipy.flowtk.nodes) status() (abipy.flowtk.flows.Flow property) (abipy.flowtk.nodes.Dependency property) (abipy.flowtk.nodes.FileNode property) (abipy.flowtk.nodes.Node property) (abipy.flowtk.works.Work property) status_counter() (abipy.flowtk.flows.Flow property) (abipy.flowtk.works.Work property) steps() (abipy.dynamics.hist.HistFile method) str2bool_or_none() (in module abipy.display.utils) str_deps() (abipy.flowtk.nodes.Node method) straceback() (abipy.core.testing.AbipyTest static method) Stress (class in abipy.tools.tensors) structure (abipy.dfpt.anaddbnc.AnaddbNcFile attribute) Structure (class in abipy.core.structure) structure() (abipy.abio.abivars.AbinitInputFile method) (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.AnaddbInput property) (abipy.core.mixins.Has_Structure property) (abipy.core.site_symmetries.SiteSymmetries property) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.ddb.Becs property) (abipy.dfpt.ddb.DdbFile property) (abipy.dfpt.ddb.DielectricTensorGenerator property) (abipy.dfpt.elastic.ElasticData property) (abipy.dfpt.gruneisen.GrunsNcFile property) (abipy.dfpt.ifc.InteratomicForceConstants property) (abipy.dfpt.msqdos.MsqDos property) (abipy.dfpt.phonons.PhbstFile property) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhdosReader method) (abipy.dfpt.phtk.NonAnalyticalPh property) (abipy.dfpt.vsound.SoundVelocity property) (abipy.electrons.bse.MdfFile method) (abipy.electrons.bse.MdfReader property) (abipy.electrons.ebands.ElectronBands property) (abipy.electrons.effmass_analyzer.EffMassAnalyzer property) (abipy.electrons.eskw.EskwFile property) (abipy.electrons.fatbands.FatBandsFile property) (abipy.electrons.fold2bloch.Fold2BlochNcfile property) (abipy.electrons.gsr.GsrFile property) (abipy.electrons.gw.SigresFile property) (abipy.electrons.optic.OpticNcFile property) (abipy.electrons.scr.ScrFile property) (abipy.eph.a2f.A2fFile property) (abipy.eph.rta.RtaFile property) (abipy.eph.sigeph.SigEPhFile property) (abipy.eph.transportfile.TransportFile property) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.wannier90.abiwan.AbiwanFile property) (abipy.wannier90.win.Wannier90Input property) (abipy.wannier90.wout.WoutFile property) (abipy.waves.wfkfile.WfkFile property) structure2wannier90() (in module abipy.wannier90.win) structure_dataframes() (abipy.core.restapi.DatabaseStructures method) structure_from_abistruct_fmt() (in module abipy.abio.abivars) structure_from_atoms() (in module abipy.flowtk.abiphonopy) structure_from_ucell() (in module abipy.data) structure_viewer (abipy.panels.core.PanelWithStructure attribute) StructurePanel (class in abipy.panels.structure) structures() (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dynamics.hist.HistFile method) subclass_from_name() (abipy.core.kpoints.KpointList class method) submit_tasks() (abipy.flowtk.works.Work method) sum_weights() (abipy.core.kpoints.KpointList method) summarize() (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) sumrule() (abipy.dfpt.ddb.Becs property) support_ext() (abipy.iotools.visualizer.Visualizer class method) supported_extensions() (abipy.iotools.visualizer.Visualizer class method) supports_fermi_surface() (abipy.electrons.ebands.ElectronBands method) symafm() (abipy.core.symmetries.AbinitSpaceGroup property) symbols_by_typat() (abipy.flowtk.abiobjects.LdauParams property) (abipy.flowtk.abiobjects.LexxParams property) symeq() (abipy.core.symmetries.AbinitSpaceGroup method) symlink_abiext() (abipy.flowtk.utils.Directory method) symmops() (abipy.core.symmetries.AbinitSpaceGroup method) symprec (abipy.core.skw.ElectronInterpolator attribute) symrec() (abipy.core.symmetries.AbinitSpaceGroup property) symrel() (abipy.core.symmetries.AbinitSpaceGroup property)

T

TaskManager (class in abipy.flowtk.tasks) tasks_from_nids() (abipy.flowtk.flows.Flow method) tdep_to_abinit() (in module abipy.dfpt.converters) TdepElectronBands (class in abipy.eph.sigeph) temp_range (abipy.panels.ddb.PanelWithAnaddbParams attribute) temp_shell_task() (abipy.flowtk.tasks.AbinitTask class method) (abipy.flowtk.tasks.AnaddbTask class method) temporary_flow() (abipy.flowtk.flows.Flow class method) tensor_at_frequency() (abipy.dfpt.ddb.DielectricTensorGenerator method) TENSOR_META (abipy.dfpt.elastic.ElasticData attribute) tests_with_fftalg() (abipy.tools.fftprof.FFTBenchmark method) thermal_conductivity_slack() (abipy.dfpt.gruneisen.GrunsNcFile method) (in module abipy.dfpt.gruneisen) time2loadlever() (in module abipy.flowtk.qutils) time2pbspro() (in module abipy.flowtk.qutils) time2slurm() (in module abipy.flowtk.qutils) timeit() (in module abipy.tools.decorators) timelimit_parser() (in module abipy.flowtk.qutils) timeout() (abipy.flowtk.qjobs.QueueJob property) TIPS() (abipy.electrons.gw.QPState class method) tips() (abipy.electrons.gw.QPState property) tmesh() (abipy.eph.rta.RtaFile property) (abipy.eph.sigeph.QpTempList property) (abipy.eph.sigeph.SigEPhFile property) tmpfile_write() (abipy.core.testing.AbipyTest method) tmpfileindir() (abipy.core.testing.AbipyTest static method) tnons() (abipy.core.symmetries.AbinitSpaceGroup property) to() (abipy.core.structure.Structure method) to_abivars() (abipy.core.structure.Structure method) (abipy.flowtk.abiobjects.LdauParams method) (abipy.flowtk.abiobjects.LexxParams method) to_array() (abipy.core.kpoints.KpointList method) to_ase_atoms() (abipy.core.structure.Structure method) to_bxsf() (abipy.electrons.ebands.ElectronBands method) to_chgcar() (abipy.core.fields.Density method) to_dataframe() (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.electrons.gw.SigresFile method) to_dict() (abipy.flowtk.flows.Flow method) to_file() (abipy.core.func1d.Function1D method) to_json() (abipy.core.kpoints.KpointList method) (abipy.electrons.ebands.ElectronBands method) to_pymatgen() (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononDos method) (abipy.electrons.ebands.ElectronBands method) to_shell_manager() (abipy.flowtk.tasks.TaskManager method) to_strdict() (abipy.electrons.gw.QPState method) to_string() (abipy.abio.abivars.AbinitInputFile method) (abipy.abio.inputs.AbinitInput method) (abipy.abio.inputs.AbstractInput method) (abipy.abio.inputs.AnaddbInput method) (abipy.abio.inputs.Cut3DInput method) (abipy.abio.inputs.MultiDataset method) (abipy.abio.inputs.OpticInput method) (abipy.abio.outputs.AbinitLogFile method) (abipy.abio.outputs.AbinitOutputFile method) (abipy.abio.robots.Robot method) (abipy.core.gsphere.GSphere method) (abipy.core.kpoints.IrredZone method) (abipy.core.kpoints.Kpath method) (abipy.core.kpoints.Kpoint method) (abipy.core.kpoints.KpointList method) (abipy.core.kpoints.Ktables method) (abipy.core.mesh3d.Mesh3D method) (abipy.core.site_symmetries.SiteSymmetries method) (abipy.core.skw.SkwInterpolator method) (abipy.core.structure.Structure method) (abipy.core.symmetries.AbinitSpaceGroup method) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.ddb.Becs method) (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.ddb.DielectricTensorGenerator method) (abipy.dfpt.elastic.ElasticData method) (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dfpt.ifc.InteratomicForceConstants method) (abipy.dfpt.msqdos.MsqDos method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhononBands method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dynamics.hist.HistFile method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.bse.DielectricFunction method) (abipy.electrons.bse.MdfFile method) (abipy.electrons.bse.MultipleMdfPlotter method) (abipy.electrons.denpot.DensityNcFile method) (abipy.electrons.ebands.ElectronBands method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDos method) (abipy.electrons.effmass_analyzer.EffMassAnalyzer method) (abipy.electrons.effmass_analyzer.Segment method) (abipy.electrons.eskw.EskwFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.fold2bloch.Fold2BlochNcfile method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.lobster.CoxpFile method) (abipy.electrons.lobster.ICoxpFile method) (abipy.electrons.lobster.LobsterAnalyzer method) (abipy.electrons.lobster.LobsterDoscarFile method) (abipy.electrons.lobster.LobsterInput method) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2f method) (abipy.eph.a2f.A2fFile method) (abipy.eph.rta.RtaFile method) (abipy.eph.sigeph.EphSelfEnergy method) (abipy.eph.sigeph.QpTempList method) (abipy.eph.sigeph.QpTempState method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.TdepElectronBands method) (abipy.eph.transportfile.TransportFile method) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.flowtk.nodes.NodeHistory method) (abipy.tools.plotting.GenericDataFilePlotter method) (abipy.tools.plotting.GenericDataFilesPlotter method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.wannier90.win.Wannier90Input method) (abipy.wannier90.wout.WoutFile method) (abipy.waves.wfkfile.WfkFile method)

to_xdatcar() (abipy.dynamics.hist.HistFile method) to_xmgrace() (abipy.dfpt.phonons.PhononBands method) (abipy.electrons.ebands.ElectronBands method) tofftmesh() (abipy.core.gsphere.GSphere method) tonumber() (in module abipy.tools.text) torange() (in module abipy.tools.duck) TorqueJob (class in abipy.flowtk.qjobs) tos() (abipy.core.kpoints.Kpoint method) tot (abipy.dfpt.raman.PowderIntensity attribute) total (abipy.electrons.lobster.CoxpFile attribute) total_dos (abipy.electrons.lobster.LobsterDoscarFile attribute) total_energy() (abipy.dfpt.ddb.DdbFile method) total_rhog() (abipy.core.fields.Density method) total_rhor() (abipy.core.fields.Density method) total_rhor_as_density() (abipy.core.fields.Density method) trace() (abipy.core.symmetries.LatticeRotation method) TransportFile (class in abipy.eph.transportfile) transpose_last3dims() (in module abipy.tools.numtools) trim_paths() (abipy.abio.robots.Robot method) tsmear() (abipy.core.mixins.Has_ElectronBands method) TYPE2NAMES (abipy.dfpt.elastic.ElasticData attribute) type_of_index (abipy.electrons.lobster.CoxpFile attribute) (abipy.electrons.lobster.ICoxpFile attribute)

U

uf_eigens() (abipy.electrons.fold2bloch.Fold2BlochNcfile method) uf_weights() (abipy.electrons.fold2bloch.Fold2BlochNcfile method) unconverged_tasks() (abipy.flowtk.flows.Flow property) units (abipy.panels.ddb.PanelWithAnaddbParams attribute) units() (abipy.abio.variable.InputVariable property) unknown_status() (abipy.flowtk.qjobs.QueueJob property) up_minus_down() (abipy.electrons.ebands.ElectronDos method) update_collection() (abipy.flowtk.nodes.NodeResults method)

update_main_area() (abipy.panels.structure.InputFileGenerator method) url() (abipy.abio.inputs.OpticVar property) use_cache (abipy.core.skw.ElectronInterpolator attribute) use_smartio() (abipy.flowtk.flows.Flow method) USER_CONFIG_DIR (abipy.flowtk.launcher.PyFlowScheduler attribute) (abipy.flowtk.tasks.TaskManager attribute) user_wants_to_exit() (abipy.flowtk.utils.Editor static method) uses_ktimereversal() (abipy.abio.inputs.AbinitInput property) uses_paral_kgb() (abipy.flowtk.tasks.AbinitTask method)

V

V1symFile (class in abipy.eph.v1sym) val_ib() (abipy.core.skw.ElectronInterpolator property) valence_electrons_per_atom() (abipy.abio.inputs.AbinitInput property) (abipy.core.structure.Structure method) validate_json_schema() (abipy.flowtk.flows.Flow method) (abipy.flowtk.nodes.NodeResults method) validate_output_parser() (in module abipy.abio.outputs) values (abipy.electrons.lobster.ICoxpFile attribute) values() (abipy.core.func1d.Function1D property) (abipy.electrons.psps.VnlProjector property) variable_checksum() (abipy.abio.inputs.AbinitInput method) varname_dtindex() (abipy.abio.abivars.AbinitInputParser static method) vars() (abipy.abio.inputs.AbinitInput property) (abipy.abio.inputs.AbstractInput property) (abipy.abio.inputs.AnaddbInput property) (abipy.abio.inputs.OpticInput property) (abipy.wannier90.win.Wannier90Input property) verbose (abipy.abio.abivars.AbinitInputParser attribute) (abipy.panels.core.AbipyParameterized attribute) VERSION (abipy.flowtk.flows.Flow attribute) version (abipy.flowtk.tasks.AbinitBuild attribute) version() (abipy.dfpt.ddb.DdbFile property) version_ge() (abipy.flowtk.tasks.AbinitBuild method) versor() (abipy.core.kpoints.Kpoint method)

versors() (abipy.core.kpoints.Kpath method) vesta_open() (abipy.dfpt.msqdos.MsqDos method) vh() (abipy.electrons.denpot.VhartreeNcFile method) VhartreeNcFile (class in abipy.electrons.denpot) VhartreePotential (class in abipy.core.fields) vhxc() (abipy.electrons.denpot.VhxcNcFile method) VhxcNcFile (class in abipy.electrons.denpot) VhxcPotential (class in abipy.core.fields) view_phononwebsite() (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.phonons.PhononBands method) visualize() (abipy.core.structure.Structure method) (abipy.dynamics.hist.HistFile method) visualize_structure_with() (abipy.core.mixins.Has_Structure method) visualize_ur2() (abipy.waves.pwwave.PWWaveFunction method) (abipy.waves.wfkfile.WfkFile method) Visualizer (class in abipy.iotools.visualizer) vks() (abipy.electrons.denpot.PotNcFile method) VksPotential (class in abipy.core.fields) VnlProjector (class in abipy.electrons.psps) volume_animate() (abipy.display.mvtk.MayaviFieldAnimator method) volumes() (abipy.dfpt.gruneisen.GrunsNcFile method) vxc() (abipy.electrons.denpot.VxcNcFile method) VxcNcFile (class in abipy.electrons.denpot) VxcPotential (class in abipy.core.fields)

W

w_range (abipy.panels.ddb.PanelWithAnaddbParams attribute) wal_sbk() (abipy.electrons.fatbands.FatBandsFile method) walm_sbk() (abipy.electrons.fatbands.FatBandsFile method) wann_centers() (abipy.wannier90.abiwan.AbiwanFile method) wann_spreads() (abipy.wannier90.abiwan.AbiwanFile method) Wannier90Input (class in abipy.wannier90.win) warning (abipy.panels.core.AbipyParameterized attribute) warning() (abipy.flowtk.nodes.NodeHistory method) wdg_exts_with_get_panel() (abipy.panels.core.AbipyParameterized method) weight() (abipy.core.kpoints.Kpoint property) weights (abipy.core.kpoints.Ktables attribute) weights() (abipy.core.kpoints.KpointList property) wfk_filepath() (abipy.flowtk.tasks.OpticTask property) WfkFile (class in abipy.waves.wfkfile) what_list() (abipy.dynamics.hist.HistRobot property) which() (abipy.core.testing.AbipyTest static method) widget2py() (in module abipy.display.utils) with_gaps (abipy.panels.core.PanelWithElectronBands attribute) with_points_along_path() (abipy.electrons.ebands.ElectronBands method) wlabel_from_units() (in module abipy.core.abinit_units) wmesh() (abipy.dfpt.phonons.PhdosReader method) (abipy.electrons.bse.MdfReader method) (abipy.electrons.optic.OpticNcFile method) Work (class in abipy.flowtk.works) WorkPanel (class in abipy.panels.works) works() (abipy.flowtk.flows.Flow property) WoutFile (class in abipy.wannier90.wout) wpoints() (abipy.electrons.scr.ScrFile property) wrap_to_bz() (abipy.core.kpoints.Kpoint method) (in module abipy.core.kpoints) wrap_to_ws() (abipy.core.kpoints.Kpoint method) (in module abipy.core.kpoints) write() (abipy.abio.inputs.AbstractInput method) (abipy.abio.inputs.Cut3DInput method) (abipy.abio.inputs.MultiDataset method) (abipy.dfpt.ddb.DdbFile method) (abipy.electrons.lobster.LobsterInput method) (abipy.flowtk.utils.File method) write_BORN() (in module abipy.dfpt.converters) write_chgcar() (abipy.electrons.denpot.DensityNcFile method) write_cif_file() (abipy.dfpt.msqdos.MsqDos method) write_cif_with_spglib_symms() (abipy.core.structure.Structure method) write_cube() (abipy.electrons.denpot.DensityNcFile method) write_jobfile() (abipy.flowtk.tasks.TaskManager method) write_json_in_outdir() (abipy.flowtk.nodes.Node method) write_json_in_workdir() (abipy.flowtk.nodes.Node method) write_notebook() (abipy.abio.abivars.AbinitInputFile method) (abipy.abio.outputs.AbinitLogFile method) (abipy.abio.outputs.AbinitOutputFile method) (abipy.abio.outputs.AboRobot method) (abipy.abio.timer.AbinitTimerParser method) (abipy.core.mixins.NotebookWriter method) (abipy.core.restapi.DatabaseStructures method) (abipy.core.structure.Structure method) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.anaddbnc.AnaddbNcRobot method) (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.ddb.DdbRobot method) (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dfpt.vsound.SoundVelocity method) (abipy.dynamics.hist.HistFile method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.bse.MdfFile method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDosPlotter method) (abipy.electrons.eskw.EskwFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.fold2bloch.Fold2BlochNcfile method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.gw.SigresRobot method) (abipy.electrons.lobster.CoxpFile method) (abipy.electrons.lobster.ICoxpFile method) (abipy.electrons.lobster.LobsterAnalyzer method) (abipy.electrons.lobster.LobsterDoscarFile method) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.optic.OpticRobot method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2fFile method) (abipy.eph.a2f.A2fRobot method) (abipy.eph.rta.RtaFile method) (abipy.eph.rta.RtaRobot method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) (abipy.eph.transportfile.TransportFile method) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.wannier90.abiwan.AbiwanRobot method) (abipy.wannier90.wout.WoutFile method) (abipy.waves.wfkfile.WfkFile method)

write_open_notebook() (abipy.flowtk.flows.Flow method) write_phonopy_qha_inputs() (abipy.dfpt.qha.AbstractQHA method) write_tdep_lotosplitting() (in module abipy.dfpt.converters) write_vib_file() (abipy.core.structure.Structure method) write_xdatcar() (abipy.dynamics.hist.HistFile method) write_xsf() (abipy.electrons.denpot.DensityNcFile method) writelines() (abipy.flowtk.utils.File method) WrNcFile (class in abipy.eph.wr) wti_from_nids() (abipy.flowtk.flows.Flow method) wvols_qibz() (abipy.dfpt.gruneisen.GrunsNcFile method)

X

xc() (abipy.electrons.gsr.GsrFile method) XcDecorator (class in abipy.abio.decorators)

xsf_write_data() (in module abipy.iotools.xsf) xsf_write_structure() (in module abipy.iotools.xsf) xsf_write_structure_and_data_to_path() (in module abipy.iotools.xsf)

Y

YAML_FILE (abipy.flowtk.launcher.PyFlowScheduler attribute) (abipy.flowtk.tasks.TaskManager attribute) yaml_tag (abipy.flowtk.events.DilatmxError attribute) (abipy.flowtk.events.NscfConvergenceWarning attribute) (abipy.flowtk.events.RelaxConvergenceWarning attribute) (abipy.flowtk.events.ScfConvergenceWarning attribute) yield_ebands_figs() (abipy.core.mixins.Has_ElectronBands method) yield_ebands_plotly_figs() (abipy.core.mixins.Has_ElectronBands method) yield_figs() (abipy.abio.abivars.AbinitInputFile method) (abipy.abio.outputs.AbinitLogFile method) (abipy.abio.outputs.AbinitOutputFile method) (abipy.abio.outputs.AboRobot method) (abipy.abio.timer.AbinitTimerParser method) (abipy.core.mixins.NotebookWriter method) (abipy.core.restapi.DatabaseStructures method) (abipy.core.structure.Structure method) (abipy.dfpt.anaddbnc.AnaddbNcFile method) (abipy.dfpt.anaddbnc.AnaddbNcRobot method) (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.ddb.DdbRobot method) (abipy.dfpt.gruneisen.GrunsNcFile method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dfpt.vsound.SoundVelocity method) (abipy.dynamics.hist.HistFile method) (abipy.dynamics.hist.HistRobot method) (abipy.electrons.bse.MdfFile method) (abipy.electrons.ebands.ElectronBandsPlotter method) (abipy.electrons.ebands.ElectronDosPlotter method) (abipy.electrons.eskw.EskwFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.fold2bloch.Fold2BlochNcfile method) (abipy.electrons.gsr.GsrFile method) (abipy.electrons.gw.SigresFile method) (abipy.electrons.gw.SigresRobot method) (abipy.electrons.lobster.CoxpFile method) (abipy.electrons.lobster.ICoxpFile method) (abipy.electrons.lobster.LobsterAnalyzer method) (abipy.electrons.lobster.LobsterDoscarFile method) (abipy.electrons.optic.OpticNcFile method) (abipy.electrons.optic.OpticRobot method) (abipy.electrons.scr.ScrFile method) (abipy.eph.a2f.A2fFile method) (abipy.eph.a2f.A2fRobot method) (abipy.eph.rta.RtaFile method) (abipy.eph.rta.RtaRobot method) (abipy.eph.sigeph.SigEPhFile method) (abipy.eph.sigeph.SigEPhRobot method) (abipy.eph.transportfile.TransportFile method) (abipy.eph.v1sym.V1symFile method) (abipy.eph.wr.WrNcFile method) (abipy.wannier90.abiwan.AbiwanFile method) (abipy.wannier90.abiwan.AbiwanRobot method) (abipy.wannier90.wout.WoutFile method) (abipy.waves.wfkfile.WfkFile method)

yield_phbands_figs() (abipy.core.mixins.Has_PhononBands method) yield_phbands_plotly_figs() (abipy.core.mixins.Has_PhononBands method) yield_plotly_figs() (abipy.dfpt.ddb.DdbFile method) (abipy.dfpt.ddb.DdbRobot method) (abipy.dfpt.phonons.PhbstFile method) (abipy.dfpt.phonons.PhdosFile method) (abipy.dfpt.phonons.PhononBandsPlotter method) (abipy.dfpt.phonons.PhononDosPlotter method) (abipy.dynamics.hist.HistFile method) (abipy.electrons.fatbands.FatBandsFile method) (abipy.electrons.gsr.GsrFile method) yield_structure_figs() (abipy.core.mixins.Has_Structure method) yield_structure_plotly_figs() (abipy.core.mixins.Has_Structure method)

Z

Z (abipy.electrons.effmass_analyzer.Segment attribute) zero_point_energy() (abipy.dfpt.phonons.PhononDos method) zeros() (abipy.core.gsphere.GSphere method) (abipy.core.mesh3d.Mesh3D method)

zeta() (abipy.core.fields.Density method) zincblende() (abipy.core.structure.Structure class method) ZstarTensor (class in abipy.tools.tensors)