Hi,
I have IBM HPC Cluster with RedHAt 6.4 OS and IBM PMPI platform.
I wont to install Abinit 7.10.4 on it.
I try :
$module load PMPI
$./configure
but I have this erreur:
checking for mpicc... /opt/ibm/platform_mpi/bin/mpicc
checking for gcc... mpicc
checking for C compiler default output file name... a.out
checking whether the C compiler works... configure: error: in `/home/abinit-7.10.4/build':
configure: error: cannot run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details.
pleaz can you help me !!
Abinit Insstalation Help for IBM HPC
Moderators: fgoudreault, mcote
Forum rules
Please have a look at ~abinit/doc/config/build-config.ac in the source package for detailed and up-to-date information about the configuration of Abinit 8 builds.
For a video explanation on how to build Abinit 7.x for Linux, please go to: http://www.youtube.com/watch?v=DppLQ-KQA68.
IMPORTANT: when an answer solves your problem, please check the little green V-like button on its upper-right corner to accept it.
Please have a look at ~abinit/doc/config/build-config.ac in the source package for detailed and up-to-date information about the configuration of Abinit 8 builds.
For a video explanation on how to build Abinit 7.x for Linux, please go to: http://www.youtube.com/watch?v=DppLQ-KQA68.
IMPORTANT: when an answer solves your problem, please check the little green V-like button on its upper-right corner to accept it.
Abinit Insstalation Help for IBM HPC
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config.log- (31.26 KiB) Downloaded 380 times
Re: Abinit Insstalation Help for IBM HPC
Hello
First, it seems that you use GCC 4.4 which is no more supported. Please consider to upgrade to a more recent compiler like GCC4.8 or GCC4.9. Check your modules to find out what is available (module avail)
Second, consider to configure with
The error comes from a MPI library that is not found during compilation
Jordan
First, it seems that you use GCC 4.4 which is no more supported. Please consider to upgrade to a more recent compiler like GCC4.8 or GCC4.9. Check your modules to find out what is available (module avail)
Second, consider to configure with
Code: Select all
./configure --enable-mpi --with-mpi-prefix=/opt/ibm/platform_mpi/
The error comes from a MPI library that is not found during compilation
./a.out: error while loading shared libraries: libmpio.so.1: cannot open shared object file: No such file or directory
Jordan
Re: Abinit Insstalation Help for IBM HPC
I try to upgrade my gcc but i can't.
I install openmpi and try abinit is the same error on configuration
I install openmpi and try abinit is the same error on configuration
Re: Abinit Insstalation Help for IBM HPC
Salam,
I install Abinit 4.10.3 without error, but when I try to run a parall test with command :
$ mpirun -np 2 abinit < t42.files >& t42.log
I have this error in my log file:
STOP MPIFAKE: mpi_attr_get
STOP MPIFAKE: mpi_attr_get
can you help me plz ?
I install Abinit 4.10.3 without error, but when I try to run a parall test with command :
$ mpirun -np 2 abinit < t42.files >& t42.log
I have this error in my log file:
STOP MPIFAKE: mpi_attr_get
STOP MPIFAKE: mpi_attr_get
can you help me plz ?
Re: Abinit Insstalation Help for IBM HPC
Please send your configuration file (how you run ./configure) and the log file of abinit.
Re: Abinit Insstalation Help for IBM HPC
Your configuration apparently did not link properly to the MPI version (or the MPI version itself is not correctly compiled).
Matthieu Verstraete
University of Liege, Belgium
University of Liege, Belgium